Mp5g11060



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF05920 Homeobox KN domain
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
SMART SM00389 HOX_1
KOG KOG0773 Transcription factor MEIS1 and related HOX domain proteins; N-term missing; [K]
MapolyID Mapoly0093s0028 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBELL5 transcription factor, HD, homeodomain protein Published
MpHD16 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g11060.1 chr5:14938074..14950657 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g11060.2 chr5:14938074..14950657 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g11060.3 chr5:14938074..14950657 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g11060.4 chr5:14938074..14950657 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.