Mp5g13160



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
SMART SM00389 HOX_1
PANTHER PTHR33400 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED
KOG KOG0199 ACK and related non-receptor tyrosine kinases; N-term missing; [T]
KOG KOG2546 Abl interactor ABI-1, contains SH3 domain; N-term missing; C-term missing; [TZ]
KOG KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains; N-term missing; [S]
MapolyID Mapoly0032s0010 -
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD10 transcription factor, HD, homeodomain protein Published
MpLD transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13160.1 chr5:17368235..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.2 chr5:17362911..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.3 chr5:17362973..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.