Mp5g13220



Description

Annotation

Database ID Description
PANTHER PTHR24223 ATP-BINDING CASSETTE SUB-FAMILY C
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF90123 ABC transporter transmembrane region
ProSitePatterns PS00211 ABC transporters family signature.
SMART SM00382 AAA_5
FunFam G3DSA:3.40.50.300:FF:000169 ABC transporter C family member 3
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.20.1560.10:FF:000003 ABC transporter C family member 10
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF00005 ABC transporter
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00664 ABC transporter transmembrane region
CDD cd03250 ABCC_MRP_domain1
CDD cd18580 ABC_6TM_ABCC_D2
CDD cd03244 ABCC_MRP_domain2
CDD cd18579 ABC_6TM_ABCC_D1
FunFam G3DSA:1.20.1560.10:FF:000002 ABC transporter C family member 5
FunFam G3DSA:3.40.50.300:FF:000508 ABC transporter C family member 5
KOG KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [Q]
MapolyID Mapoly0032s0016 -
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
GO GO:0140359 ABC-type transporter activity
GO GO:0005524 ATP binding
GO GO:0016887 ATP hydrolysis activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpABCC12 ABC transporters Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13220.1 chr5:17459203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.2 chr5:17459203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.3 chr5:17460173..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.4 chr5:17460203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.