Mp5g17980



Description

Annotation

Database ID Description
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF75304 Amidase signature (AS) enzymes
FunFam G3DSA:3.90.1300.10:FF:000004 Outer envelope protein 64, mitochondrial
SMART SM00028 tpr_5
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
PANTHER PTHR46310 AMIDASE 1
Pfam PF01425 Amidase
Gene3D G3DSA:3.90.1300.10 Amidase signature (AS) domain
Pfam PF13181 Tetratricopeptide repeat
ProSitePatterns PS00571 Amidases signature.
Pfam PF13414 TPR repeat
SUPERFAMILY SSF48452 TPR-like
KOG KOG1211 Amidases; [J]
KOG KOG0548 Molecular co-chaperone STI1; N-term missing; [O]
MapolyID Mapoly0084s0045 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpAMI1 transcription factor, Auxin related protein, Hormone related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17980.1 chr5:22203345..22208891 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g17980.2 chr5:22203345..22208174 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.