Mp5g21580



Description

Annotation

Database ID Description
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
SUPERFAMILY SSF51445 (Trans)glycosidases
SUPERFAMILY SSF52279 Beta-D-glucan exohydrolase, C-terminal domain
Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain
PANTHER PTHR42721 SUGAR HYDROLASE-RELATED
Gene3D G3DSA:2.60.40.10 Immunoglobulins
SMART SM01217 Fn3_like_2
Gene3D G3DSA:3.20.20.300 -
FunFam G3DSA:3.40.50.1700:FF:000001 probable beta-D-xylosidase 2
Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain
Gene3D G3DSA:3.40.50.1700 -
KEGG K15920 xylan 1,4-beta-xylosidase [EC:3.2.1.37]
KEGG K05349 beta-glucosidase [EC:3.2.1.21]
MapolyID Mapoly0106s0041 -
GO GO:0046556 alpha-L-arabinofuranosidase activity
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO GO:0031222 arabinan catabolic process
GO GO:0009044 xylan 1,4-beta-xylosidase activity
GO GO:0005975 carbohydrate metabolic process
GO GO:0009505 plant-type cell wall
GO GO:0045493 xylan catabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpGH3.7 Cell wall related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21580.1 chr5:27589389..27595909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21580.2 chr5:27589389..27595909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21580.3 chr5:27590503..27595952 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.