Mp5g21760



Description

Annotation

Database ID Description
ProSiteProfiles PS51635 Patatin-like phospholipase (PNPLA) domain profile.
PANTHER PTHR32176 XYLOSE ISOMERASE
Gene3D G3DSA:3.40.1090.10 Cytosolic phospholipase A2 catalytic domain
Pfam PF01734 Patatin-like phospholipase
SUPERFAMILY SSF52151 FabD/lysophospholipase-like
KOG KOG0513 Ca2+-independent phospholipase A2; [I]
MapolyID Mapoly0106s0023 -
GO GO:0047372 monoacylglycerol lipase activity
GO GO:0004620 phospholipase activity
GO GO:0006629 lipid metabolic process

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

MpMYC-mediated marker gene whose OPDA-induced expression was significantly suppressed by co-treatment with peptide 4, used as a readout of MYC inhibition.

0 core 3 peripheral

Takaoka, Y., et al. (2024) · PNAS Nexus  research experimental tool
MpMYC-mediated marker gene whose OPDA-induced expression was significantly suppressed by co-treatment with peptide 4, used as a readout of MYC inhibition.
Kneeshaw, S., et al. (2022) · PNAS  research experimental tool
Patatin-like phospholipase gene measured by qPCR as a wound-responsive marker.
Soriano, G., et al. (2022) · New Phytologist  research experimental background
Patatin-like lipase (Mp5g21760); wound-responsive DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21760.1 chr5:27791989..27796625 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g21760 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g21760 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.