Mp5g22280



Description

Annotation

Database ID Description
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
CDD cd00167 SANT
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
SMART SM00717 sant
SUPERFAMILY SSF46689 Homeodomain-like
FunFam G3DSA:1.10.10.60:FF:000010 Transcriptional activator Myb isoform A
FunFam G3DSA:1.10.10.60:FF:000016 Transcriptional activator Myb isoform A
PANTHER PTHR45614 MYB PROTEIN-RELATED
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
KOG KOG0051 RNA polymerase I termination factor, Myb superfamily; N-term missing; [K]
MapolyID Mapoly0166s0022 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
Mp3R-MYB6 transcription factor, MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g22280.1 chr5:28544727..28549552 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.