Mp5g22790



Description

Annotation

Database ID Description
ProSitePatterns PS00633 Bromodomain signature.
Coils Coil Coil
SMART SM00297 bromo_6
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50014 Bromodomain profile.
FunFam G3DSA:3.10.20.90:FF:000223 Transcription initiation factor TFIID subunit 1
Gene3D G3DSA:1.10.1100.10 -
SMART SM00213 ubq_7
PRINTS PR00503 Bromodomain signature
ProSiteProfiles PS50053 Ubiquitin domain profile.
SUPERFAMILY SSF47370 Bromodomain
SUPERFAMILY SSF54236 Ubiquitin-like
Gene3D G3DSA:3.10.20.90 -
PANTHER PTHR13900 TRANSCRIPTION INITIATION FACTOR TFIID
Pfam PF00439 Bromodomain
CDD cd17064 Ubl_TAFs_like
Pfam PF09247 TATA box-binding protein binding
Pfam PF12157 Protein of unknown function (DUF3591)
Gene3D G3DSA:1.20.920.10 -
SUPERFAMILY SSF47055 TAF(II)230 TBP-binding fragment
Pfam PF00240 Ubiquitin family
Pfam PF15288 Zinc knuckle
KEGG K03125 transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; C-term missing; [K]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; N-term missing; [K]
MapolyID Mapoly0010s0177 -
GO GO:0001091 RNA polymerase II general transcription initiation factor binding
GO GO:0017025 TBP-class protein binding
GO GO:0004402 histone acetyltransferase activity
GO GO:0005515 protein binding
GO GO:0051123 RNA polymerase II preinitiation complex assembly
GO GO:0005669 transcription factor TFIID complex
GO GO:0016251 RNA polymerase II general transcription initiation factor activity
GO GO:0006366 transcription by RNA polymerase II

Nomenclature

Gene symbol Product Transcript ID Status
MpHAT5 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g22790.1 chr5:29079089..29098035 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.