Mp6g02350



Description

Annotation

Database ID Description
PANTHER PTHR11157 FATTY ACID ACYL TRANSFERASE-RELATED
Pfam PF01151 GNS1/SUR4 family
KOG KOG3071 Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme; [I]
MapolyID Mapoly0035s0020 -
GO GO:0019367 fatty acid elongation, saturated fatty acid
GO GO:0030148 sphingolipid biosynthetic process
GO GO:0030176 obsolete integral component of endoplasmic reticulum membrane
GO GO:0034626 fatty acid elongation, polyunsaturated fatty acid
GO GO:0009922 fatty acid elongase activity
GO GO:0042761 very long-chain fatty acid biosynthetic process
GO GO:0034625 fatty acid elongation, monounsaturated fatty acid
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpELO1 Δ6-fatty acid elongase Published

Associated Literature (AI-based literature mining, Beta-version)

ELO-like enzyme mediating Delta-6 elongation; isolated and characterized, and co-expressed with MpDES6/MpDES5 in Pichia to reconstitute C20 PUFA biosynthesis.

1 core 2 peripheral

Kajikawa M, Yamato KT, Kohzu Y, Nojiri M, Sakuradani E, Shimizu S, Sakai Y, Fukuzawa H, Ohyama K. (2004) · Plant Mol Biol  research experimental subject
ELO-like enzyme mediating Delta-6 elongation; isolated and characterized, and co-expressed with MpDES6/MpDES5 in Pichia to reconstitute C20 PUFA biosynthesis.
Kajikawa M, Yamato KT, Sakai Y, Fukuzawa H, Ohyama K, Kohchi T. (2006) · FEBS Lett  research sequence comparator
The previously characterized Delta-6-elongase MpELO1 is used here as the closest comparator: MpELO2 shares 46% identity and a conserved exon-intron structure with it, and is proposed to have arisen by local duplication of MpELO1.
Kneeshaw, S., et al. (2022) · PNAS  research citation background
Δ6-elongase mentioned only as part of the described ALA-to-EPA biosynthetic pathway.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g02350.1 chr6:3277055..3279959 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.