Mp6g08690



Description

Annotation

Database ID Description
Pfam PF00847 AP2 domain
CDD cd00018 AP2
PANTHER PTHR31985 ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED
SMART SM00380 rav1_2
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51032 AP2/ERF domain profile.
FunFam G3DSA:3.30.730.10:FF:000001 Ethylene-responsive transcription factor 2
SUPERFAMILY SSF54171 DNA-binding domain
Gene3D G3DSA:3.30.730.10 AP2/ERF domain
PRINTS PR00367 Ethylene responsive element binding protein signature
KEGG K09286 EREBP-like factor
MapolyID Mapoly0060s0052 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpERF13 transcription factor, AP2/ERF Published

Associated Literature (AI-based literature mining, Beta-version)

MpERF13 locus; master ERF/AP2 TF for oil body formation. GOF (~6x oil bodies), KO abolishes oil bodies.

1 core 8 peripheral

Kanazawa, T., et al. (2020) · Nature Communications  research experimental subject
MpERF13 locus; master ERF/AP2 TF for oil body formation. GOF (~6x oil bodies), KO abolishes oil bodies.
Kawamura, S., et al. (2022) · Plant & Cell Physiology  research citation subject
Transcription factor positive regulator of oil body cell differentiation; gain-of-function alleles increase oil body cell number (cited). Used as a case study to demonstrate co-expression and DEG analyses in the tool.
Kanazawa, T., et al. (2022) · Frontiers in Plant Science  research citation background
Transcription factor mediating oil body cell differentiation and oil body development in M. polymorpha; cited as upstream regulatory machinery.
Forestier ECF, Asprilla P, Bonter I, Romani F, Frangedakis E, Haseloff J. (2026) · Communications biology  research citation background
Cited as a transcription factor involved in oil body cell differentiation from prior developmental work.
Romani, F., et al. (2020) · Current Biology  research experimental comparator
ERF transcription factor; oil-body regulator referenced in relation to MpC1HDZ.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g08690.1 chr6:11387099..11389979 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g08690 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g08690 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.