Mp6g09620



Description

Annotation

Database ID Description
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
SMART SM00320 WD40_4
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
PRINTS PR00320 G protein beta WD-40 repeat signature
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR19923 WD40 REPEAT PROTEINPRL1/PRL2-RELATED
Gene3D G3DSA:2.130.10.10 -
FunFam G3DSA:2.130.10.10:FF:000012 Putative pleiotropic regulator 1
Pfam PF00400 WD domain, G-beta repeat
CDD cd00200 WD40
SUPERFAMILY SSF50978 WD40 repeat-like
KEGG K12862 pleiotropic regulator 1
KOG KOG0285 Pleiotropic regulator 1; [A]
MapolyID Mapoly0016s0006 -
GO GO:0071011 precatalytic spliceosome
GO GO:0071013 catalytic step 2 spliceosome
GO GO:0000974 Prp19 complex
GO GO:0005515 protein binding
GO GO:0000398 mRNA splicing, via spliceosome

Nomenclature

Gene symbol Product Transcript ID Status
MpPRL1 G protein beta WD-40 repeat signature Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g09620.1 chr6:12656724..12664759 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.