Mp6g10990



Description

Annotation

Database ID Description
ProSitePatterns PS01132 Actins and actin-related proteins signature.
Gene3D G3DSA:3.30.420.40 -
FunFam G3DSA:3.90.640.10:FF:000001 Actin, muscle
FunFam G3DSA:3.30.420.40:FF:000058 Putative actin-related protein 5
PANTHER PTHR11937 ACTIN
SMART SM00268 actin_3
ProSitePatterns PS00432 Actins signature 2.
SUPERFAMILY SSF53067 Actin-like ATPase domain
CDD cd00012 NBD_sugar-kinase_HSP70_actin
Gene3D G3DSA:3.90.640.10 Actin; Chain A, domain 4
FunFam G3DSA:3.30.420.40:FF:000291 Actin, alpha skeletal muscle
PRINTS PR00190 Actin signature
FunFam G3DSA:3.30.420.40:FF:000404 Major actin
ProSitePatterns PS00406 Actins signature 1.
Pfam PF00022 Actin
KEGG K10355 actin, other eukaryote
KOG KOG0676 Actin and related proteins; [Z]
MapolyID Mapoly0016s0137 -

Nomenclature

Gene symbol Product Transcript ID Status
MpACT1 actin Published

Associated Literature (AI-based literature mining, Beta-version)

actin (from nomenclature)

0 core 7 peripheral

Yan X, Peng B, Miao Z, Li L, Zhang Y, Hu X, Tang K. (2026) · International journal of biological macromolecules  research experimental tool
The native MpAct1-derived terminator (T_MpAct1) was benchmarked among 15 terminators in the transient expression system and identified as a top-performing terminator element.
Higo, A., et al. (2018) · Nature Communications  research experimental tool
Actin gene used as an internal reference control for quantitative RT-PCR analysis.
Wang, M., et al. (2024a) · Communications Biology  research experimental tool
Reference gene used to normalize relative expression levels in qRT-PCR.
Hani, U., et al. (2024) · Plant Physiology and Biochemistry  research experimental tool
ACTIN1 (Mp6g10990); housekeeping reference gene for normalization.
Yotsui, I., et al. (2023) · Current Biology  research experimental tool
Actin; qPCR reference.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g10990.1 chr6:13945424..13949206 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g10990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g10990 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.