| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| Gene3D | G3DSA:2.160.20.10 | - |
| SMART | SM00710 | pbh1 |
| PANTHER | PTHR31339 | PECTIN LYASE-RELATED |
| Pfam | PF00295 | Glycosyl hydrolases family 28 |
| KOG | KOG4532 | WD40-like repeat containing protein; N-term missing; C-term missing; [R] |
| MapolyID | Mapoly0056s0050 | - |
| GO | GO:0004650 | polygalacturonase activity |
| GO | GO:0005975 | carbohydrate metabolic process |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH28.6 | Cell wall related protein | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g15380.1 GCGAGGCGAC TCGAGCCCCC ATCGTTTCTT CCTCCCCCTT GCCTGCTCTT GCTGCTCGGG ACCTCGAGGG GATGCGCTGA CAGAGAGAGA GAGAGAGAGA TTGGAAGGCT TTAGGGCGAG GAGGGAGGGG GGTTACTGCA TGCTGAGGCG CAGTCGAGCG CTGCACACGT CGGGGAGCCG AGGCCATGGG GCGGACAATT GTCCTGCTCC TGCTGATCGC GCTCTGCCCC GGAATCGGTC TCGTACGGAG TGCGAGAATC GAATGCCTCG TGGCTGGGGA CGCCACCGCC GCCCGTGATC GTCCTGCGCG TGGAAGCGAG CTGGAGATGC CGGGGCATCT GGTTGAATCT CGACGCAATT GTAATGTGGT TGATTACGGT GCCAAAGGGA ATGGCGAGGA TTTCGATACC GCGGCCATGC AGGAGGCGAT CGATGACTGC GCCTGCTGGG GTGGTGGTGG GAGAGTTCAT GTCCCCCCCG GCAATTACCT CACCGCCACG CTTTTTCTCC GGTCCAACAT CGAGTTGTAC GTCGAACGCG GTGCCACGAT CTATGGCAGC CCCGCTCAGA GTGATTACCC AGCGTCGAGC TCACGGTGGT ACGTGCTTCT GGCCGAAGGC GTGCACAATG TGCAGATCAC GGGCGGCGGA ACCGTGGACG GCCAAGCGGA TAAGTTCGTG GTACGGGAGG ACCCGAAGAA GAACGTAATG GTGAGCTGGA ATACGACTGG AGATTGTGCC GGTGATGAAT GTCGACCTCG GCTGATCGGC TTCCTGGACA GCACAAACTT CCAGCTGCGA GATTTGTATC TCCATCAGCC TGCGTACTGG TGGTAAGACA CTGTCAGTTC ATAGTCGCAC AGTTTTGGCT CCACGTCTGA TGACCTAAAT CTGCACCTCT CAAGCTCCAG ACCCGCTCAT CTTTTAGGTG ACAACTTGCC TGCCGTTATG AGCCACATCC CTTCGACCAC CGAAAATCGA GACATGTTTT ATACATTTGT GTAGATGTTG TTAATTTTTG TTTGCGGAGA ATCTGGTTCC AACAACTGCA AAAGAACTTG GCTGGATTTT GACAATCAGG TCGATTATTG TCGAATCAGC GTGCTCAATG GTAGCTGACA CGCTGTAATC GGGAAAACCC TCCGAAACGA GATAGCAATG AACTTGAAAG CTCTTGGCTA GGAGCCGAAG GGAATGGAAT TTACACCTGA TCGACTGATC GGGGAGAGTA CAGCGAGCAT CTGGGAACTA GAGAACTTCA AATGCAAGGG TAGAGGAAAG CCGGGGCTAA AAAGAGAGCA ATAATTCAGC TGTTAATGAC TGTTCCCTTT GCAGGCCAGT CATTGAAACT ATGTGTCAGG AGCGCTCAGA GACGTCAGAC CGAACCGAAC AATAGCAAGT TCATTTGGAA CAAAAGCTTT TGTCTTGAAC CTATAATTGA AGACAAAAGC TTTTGTTATA AATGTCTTAC AAAATGTGCG CGACCTATGA ATGTGAATCA AATCGAGTTC AATTTCTGAG ACTGTCAACG ACAGATAGAA CTCAGCATTA TCGCTGTCTG GCCAGGTGTC AGGAATTTTG AAGTTTGGAG AAACCGTAGA CTGCAGACTT ACACTACGAA CACCGATGTT ATGAGCAGAA ACACAACGGA GAAGATATTT ATTGGTGAGA TCCGTGCACT GAGCCTTTCC ACTCTGATTA GACATTACTC ATATCACTTG TAACGCATGT GTCTAGAAAG AGCCCATCAT TACGTCTGCT ATCAGCATCT CTTGCAATAA TGGCAGTTTC TTCATATCCC TTGCCTCTTC CCTGGTCGCT GGAAATCCTA AAGCCGTGCC TTGAGGTCTG TTGGAAGAGG TTTTTAAACG CTGAATCATA TTGTAGTTTT TGTGACATAC CTTTTCAGAA GCTATGTGAG AAACGCTAAG GAGTGGGCTA AGATTAACAG CGGGGCCGTT GACATATGAT ATGTGGACAA AGCGTGTACT TTATAGTTAT GAATAAGACA GAATTTTAAG ATAGAAGTCC GGAGAACGAG CTTCTTTTAT TTTGGTTTGG AGGATTATGT CATGTATACT CAAATATGTT TCCAAATCTA CAAAATAGTG GCGTGGACAG GAAGTGAGCT GTTCGAGCAG GAGCCAGAAG TGCGATTTGA GTAGCCAGAA GTGCGATTTC AGTAGCATTG TTGGCATGTG CAGTTGTCTG ACAACTCAAC GTAGGCTGAT TGCATCAAGA GTTGCTGGTT GGTTACATCT TCGAGAGTTC AGTATGGACG AAACGAAAGT TTCGGTTGAT TGCTCTAAGA GCTGCTGGTT GGTTACATCT TCGAGAGTTC AGCATGGACG AAACGATAGA TTCGGGGGTT GCGTTCACTT CTATTTTGTG TGCTTCTCCT TCATCTTTCG TTTACGGTCC CACTGGAGCC AGTTTTACCG CAGTATCGCT CTTCAAGATC ACAATCTCTA TCCCTGGATA GGGTTCGCAA GTTTTATATC CGCTTAGCAA CCAGTTGTTC AAAGTGGGTC TTCATGTACT CATTCGCTGA GCGTGAGGTG GCTGATGTAG ACATTCAGGA ACTTGGGATT AGGAGAGTGA GAACCTTGAT TTAGATCGTG TTATTGACTT GTGATTTAGT TATTTATTAT CGTTCCCAAC CTGCACTGTA AACCCCTTGC ATTTCTTGTC TGGCACTAGC GTCGTCCTCT GTACCTTCTC ACTGTTTCTA GTTTACGAAC ACCTTCCCAC CACAGATGTT ACCTCCTTTG CAATGTTGGA AGTTATATTT CCTTGTTCAT CCGTATGTCC CACTACCTGT CCTGGTCTGT ATAAATCTAA TTTTCAGTGA ACGTTGCTCG TGACTAATAC TATTTCGTTT TCAAATCTTT TGTTTTTTGG CAGCTTACAC ATTGTCAGAT GCAATGAAGT GCTGGTTGAA AATGTGACCA TATATGGGGA CTTCAATACG CCCAACAACG ATGGCATTGA CATTGAAGAT ACCAACAACA CACGCATCGT TGGCTGTCAT ATCGATACTG GTGATGATGC AATTTGTCCC AAAACATACG CAGGTCCTCT GTATAACTTA ACAGTAACGG ACTGTTGGAT CAGAACAAAA TCATCTGCAG TGAAGTTCGG CAGTGCCACA TTTCACGACT TTCATGGACT GCGCTTCGAA AGACTCACGA TTAAAGACTC CCACAGAGGG CTTGCATTTC AACTTCGTGA TGGAGGTATG ATATCTTGTC GCACTCCGAC AGTAGTTGTA TATGCGCTTT TTCTACCGCA TGTACAAGAT TATCTTGCAC ATATTTGGAG CATAGTATGT GATGGAATCG TGTCAATGCT TGGTGATGGC AGAGCTTTGT ATTTTGTAGA ATTGCAAGTA TGCTTCTACA GAGTATTTGC AATTCTGTAA AGCATTATGT ATGTTTAGAA GAAAGTCTCT TATACTTTAG CAGGATTCAT TGTTAGGTTT TTAAGCAAAC GGAGAAATCA GAGATGGTGA AGTCTTAGAA TTTATGTGGA GATATTTCTC TGCCTCAGAA TGCTTCTCCA GACAAAATTG TAGGAGTATT TGTTGGCATC CTTCATCCTT TTTCTTTTAT TCCAAAAAAC GAACAAGCTC TGTGCTTTGC TAGTGTACCC ACTTCATTTC TAACAAATTG TTTCACTTTC CTCATGGCAC AAATTTGAGG AAGTAGAATT TCTAATTGTC ACCGTTTTTT TATTCGTTGG TTGTGCAGGA AGTATCTCGG ACGTGGTGTT TGCAAACATA GAAATGTCAA CTCGATACTA TCACCCATCA TGGTGGGGAC GTGCAGAACC AATATATATG ACAGCTTGCC CACGGGATAG CGAAACAGTG GTCGGGTCCA TTTCCGATGT CCATTTTATC AATATATCTT CAACATCAGA AAATGGTGTT TTTATATCTG GTTCTGCGGG GAGTATCTTG ACCGGTGTCG TTTTCCAAAA CGTCTCTCTG AACTTCACCA ATGCAGACGG TGTTGATACT GAAACCTTCC ATGATTATAG ACCAGGTTGT CGGGGTCTTG TTCCTCACGC ATCGTCGGGG TTATTCATGG AGTATGCATC AAACCTCACT TTCAGAGACG TCACACTACG ATGGGCTCCT AATGTGAAAT GGGACACACC ATTCGAATTT ACTCCGAAGA CTGTGGGCAG ATTAAATATT TTGAATGTTC TTTCAGATAC AGACTCACAT GGACTTCCTG TCTAATTGCT GACACCTTCT CCACACATTT ATGTGTACAA AATGTATAGA CAAGACCCTC CTTTGATTCT CTATTTCACC TCCACTTTTA TCAAATGACA TCCGTCTTCA GCGAATCTCA GGTGCATTTT CTACCTATTC TTTTCACCGT TTTCCCAAAG ACTTTGTGGT AAAGTTTGCG ATGGCGAATG TGTAACATAG CGTATCCGGT GAGGGCAATT TCAGAAAGCT GCCCACCATA GCTTTGATGG TTACGAAGAG GCCCAGTAAC GAAAGACTCG TACTGGCTGA TAGTTCTGTC CTCAAGATGT TGGTCCAAAG CGCTGTACAG GCTGTGGACT GACTGCAATT GAGCTTGATA ATCAAGATTG CCTTTGGGGC ACCCCTTGAC TTGTTCAGTC CTAGACCAAA TTCGTGCACT GATGTGAGTC AAAGTCGGTG GGTGAGTTTG ACGATGGGAA CTTGAATATG CAGTAAGCAG AAGACAGTAC ATCGTCTCAA CTACTGCAGT CACCCCGTAG ATATTGCGCA ACCTCTTGAA GTGAATACAT GCAAATGCTG TTTTTACATA CAATTTATTG GATCTGAAGT TTCAGATTTT CG |
mRNA UTR + CDS |
| >Mp6g15380.1 GCGAGGCGAC TCGAGCCCCC ATCGTTTCTT CCTCCCCCTT GCCTGCTCTT GCTGCTCGGG ACCTCGAGGG GATGCGCTGA CAGAGAGAGA GAGAGAGAGA TTGGAAGGCT TTAGGGCGAG GAGGGAGGGG GGTTACTGCA TGCTGAGGCG CAGTCGAGCG CTGCACACGT CGGGGAGCCG AGGCCATGGG GCGGACAATT GTCCTGCTCC TGCTGATCGC GCTCTGCCCC GGAATCGGTC TCGTACGGAG TGCGAGAATC GAATGCCTCG TGGCTGGGGA CGCCACCGCC GCCCGTGATC GTCCTGCGCG TGGAAGCGAG CTGGAGATGC CGGGGCATCT GGTTGAATCT CGACGCAATT GTAATGTGGT TGATTACGGT GCCAAAGGGA ATGGCGAGGA TTTCGATACC GCGGCCATGC AGGAGGCGAT CGATGACTGC GCCTGCTGGG GTGGTGGTGG GAGAGTTCAT GTCCCCCCCG GCAATTACCT CACCGCCACG CTTTTTCTCC GGTCCAACAT CGAGTTGTAC GTCGAACGCG GTGCCACGAT CTATGGCAGC CCCGCTCAGA GTGATTACCC AGCGTCGAGC TCACGGTGGT ACGTGCTTCT GGCCGAAGGC GTGCACAATG TGCAGATCAC GGGCGGCGGA ACCGTGGACG GCCAAGCGGA TAAGTTCGTG GTACGGGAGG ACCCGAAGAA GAACGTAATG GTGAGCTGGA ATACGACTGG AGATTGTGCC GGTGATGAAT GTCGACCTCG GCTGATCGGC TTCCTGGACA GCACAAACTT CCAGCTGCGA GATTTGTATC TCCATCAGCC TGCGTACTGG TGCTTACACA TTGTCAGATG CAATGAAGTG CTGGTTGAAA ATGTGACCAT ATATGGGGAC TTCAATACGC CCAACAACGA TGGCATTGAC ATTGAAGATA CCAACAACAC ACGCATCGTT GGCTGTCATA TCGATACTGG TGATGATGCA ATTTGTCCCA AAACATACGC AGGTCCTCTG TATAACTTAA CAGTAACGGA CTGTTGGATC AGAACAAAAT CATCTGCAGT GAAGTTCGGC AGTGCCACAT TTCACGACTT TCATGGACTG CGCTTCGAAA GACTCACGAT TAAAGACTCC CACAGAGGGC TTGCATTTCA ACTTCGTGAT GGAGGAAGTA TCTCGGACGT GGTGTTTGCA AACATAGAAA TGTCAACTCG ATACTATCAC CCATCATGGT GGGGACGTGC AGAACCAATA TATATGACAG CTTGCCCACG GGATAGCGAA ACAGTGGTCG GGTCCATTTC CGATGTCCAT TTTATCAATA TATCTTCAAC ATCAGAAAAT GGTGTTTTTA TATCTGGTTC TGCGGGGAGT ATCTTGACCG GTGTCGTTTT CCAAAACGTC TCTCTGAACT TCACCAATGC AGACGGTGTT GATACTGAAA CCTTCCATGA TTATAGACCA GGTTGTCGGG GTCTTGTTCC TCACGCATCG TCGGGGTTAT TCATGGAGTA TGCATCAAAC CTCACTTTCA GAGACGTCAC ACTACGATGG GCTCCTAATG TGAAATGGGA CACACCATTC GAATTTACTC CGAAGACTGT GGGCAGATTA AATATTTTGA ATGTTCTTTC AGATACAGAC TCACATGGAC TTCCTGTCTA ATTGCTGACA CCTTCTCCAC ACATTTATGT GTACAAAATG TATAGACAAG ACCCTCCTTT GATTCTCTAT TTCACCTCCA CTTTTATCAA ATGACATCCG TCTTCAGCGA ATCTCAGGTG CATTTTCTAC CTATTCTTTT CACCGTTTTC CCAAAGACTT TGTGGTAAAG TTTGCGATGG CGAATGTGTA ACATAGCGTA TCCGGTGAGG GCAATTTCAG AAAGCTGCCC ACCATAGCTT TGATGGTTAC GAAGAGGCCC AGTAACGAAA GACTCGTACT GGCTGATAGT TCTGTCCTCA AGATGTTGGT CCAAAGCGCT GTACAGGCTG TGGACTGACT GCAATTGAGC TTGATAATCA AGATTGCCTT TGGGGCACCC CTTGACTTGT TCAGTCCTAG ACCAAATTCG TGCACTGATG TGAGTCAAAG TCGGTGGGTG AGTTTGACGA TGGGAACTTG AATATGCAGT AAGCAGAAGA CAGTACATCG TCTCAACTAC TGCAGTCACC CCGTAGATAT TGCGCAACCT CTTGAAGTGA ATACATGCAA ATGCTGTTTT TACATACAAT TTATTGGATC TGAAGTTTCA GATTTTCG |
CDS |
| >Mp6g15380.1 ATGGGGCGGA CAATTGTCCT GCTCCTGCTG ATCGCGCTCT GCCCCGGAAT CGGTCTCGTA CGGAGTGCGA GAATCGAATG CCTCGTGGCT GGGGACGCCA CCGCCGCCCG TGATCGTCCT GCGCGTGGAA GCGAGCTGGA GATGCCGGGG CATCTGGTTG AATCTCGACG CAATTGTAAT GTGGTTGATT ACGGTGCCAA AGGGAATGGC GAGGATTTCG ATACCGCGGC CATGCAGGAG GCGATCGATG ACTGCGCCTG CTGGGGTGGT GGTGGGAGAG TTCATGTCCC CCCCGGCAAT TACCTCACCG CCACGCTTTT TCTCCGGTCC AACATCGAGT TGTACGTCGA ACGCGGTGCC ACGATCTATG GCAGCCCCGC TCAGAGTGAT TACCCAGCGT CGAGCTCACG GTGGTACGTG CTTCTGGCCG AAGGCGTGCA CAATGTGCAG ATCACGGGCG GCGGAACCGT GGACGGCCAA GCGGATAAGT TCGTGGTACG GGAGGACCCG AAGAAGAACG TAATGGTGAG CTGGAATACG ACTGGAGATT GTGCCGGTGA TGAATGTCGA CCTCGGCTGA TCGGCTTCCT GGACAGCACA AACTTCCAGC TGCGAGATTT GTATCTCCAT CAGCCTGCGT ACTGGTGCTT ACACATTGTC AGATGCAATG AAGTGCTGGT TGAAAATGTG ACCATATATG GGGACTTCAA TACGCCCAAC AACGATGGCA TTGACATTGA AGATACCAAC AACACACGCA TCGTTGGCTG TCATATCGAT ACTGGTGATG ATGCAATTTG TCCCAAAACA TACGCAGGTC CTCTGTATAA CTTAACAGTA ACGGACTGTT GGATCAGAAC AAAATCATCT GCAGTGAAGT TCGGCAGTGC CACATTTCAC GACTTTCATG GACTGCGCTT CGAAAGACTC ACGATTAAAG ACTCCCACAG AGGGCTTGCA TTTCAACTTC GTGATGGAGG AAGTATCTCG GACGTGGTGT TTGCAAACAT AGAAATGTCA ACTCGATACT ATCACCCATC ATGGTGGGGA CGTGCAGAAC CAATATATAT GACAGCTTGC CCACGGGATA GCGAAACAGT GGTCGGGTCC ATTTCCGATG TCCATTTTAT CAATATATCT TCAACATCAG AAAATGGTGT TTTTATATCT GGTTCTGCGG GGAGTATCTT GACCGGTGTC GTTTTCCAAA ACGTCTCTCT GAACTTCACC AATGCAGACG GTGTTGATAC TGAAACCTTC CATGATTATA GACCAGGTTG TCGGGGTCTT GTTCCTCACG CATCGTCGGG GTTATTCATG GAGTATGCAT CAAACCTCAC TTTCAGAGAC GTCACACTAC GATGGGCTCC TAATGTGAAA TGGGACACAC CATTCGAATT TACTCCGAAG ACTGTGGGCA GATTAAATAT TTTGAATGTT CTTTCAGATA CAGACTCACA TGGACTTCCT GTCTAA |
Protein |
| >Mp6g15380.1 MGRTIVLLLL IALCPGIGLV RSARIECLVA GDATAARDRP ARGSELEMPG HLVESRRNCN VVDYGAKGNG EDFDTAAMQE AIDDCACWGG GGRVHVPPGN YLTATLFLRS NIELYVERGA TIYGSPAQSD YPASSSRWYV LLAEGVHNVQ ITGGGTVDGQ ADKFVVREDP KKNVMVSWNT TGDCAGDECR PRLIGFLDST NFQLRDLYLH QPAYWCLHIV RCNEVLVENV TIYGDFNTPN NDGIDIEDTN NTRIVGCHID TGDDAICPKT YAGPLYNLTV TDCWIRTKSS AVKFGSATFH DFHGLRFERL TIKDSHRGLA FQLRDGGSIS DVVFANIEMS TRYYHPSWWG RAEPIYMTAC PRDSETVVGS ISDVHFINIS STSENGVFIS GSAGSILTGV VFQNVSLNFT NADGVDTETF HDYRPGCRGL VPHASSGLFM EYASNLTFRD VTLRWAPNVK WDTPFEFTPK TVGRLNILNV LSDTDSHGLP V |