Mp7g05320



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Coils Coil Coil
SMART SM00389 HOX_1
SUPERFAMILY SSF69349 Phage fibre proteins
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF05920 Homeobox KN domain
Gene3D G3DSA:1.10.10.60 -
SMART SM01255 KNOX1_2
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
Pfam PF03790 KNOX1 domain
KOG KOG0773 Transcription factor MEIS1 and related HOX domain proteins; N-term missing; [K]
MapolyID Mapoly0194s0001 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpHD21 transcription factor, HD, homeodomain protein Published
MpKNOX2 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g05320.1 chr7:7484011..7491062 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.