| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF47661 | t-snare proteins |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd00179 | SynN |
| Coils | Coil | Coil |
| FunFam | G3DSA:1.20.58.70:FF:000003 | Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group |
| ProSitePatterns | PS00914 | Syntaxin / epimorphin family signature. |
| Gene3D | G3DSA:1.20.58.70 | - |
| SMART | SM00397 | tSNARE_6 |
| Gene3D | G3DSA:1.20.5.110 | - |
| ProSiteProfiles | PS50192 | t-SNARE coiled-coil homology domain profile. |
| PANTHER | PTHR19957 | SYNTAXIN |
| SMART | SM00503 | SynN_4 |
| CDD | cd15848 | SNARE_syntaxin1-like |
| Pfam | PF05739 | SNARE domain |
| FunFam | G3DSA:1.20.5.110:FF:000008 | Syntaxin 132 |
| Pfam | PF00804 | Syntaxin |
| KEGG | K08486 | syntaxin 1B/2/3 |
| KOG | KOG0810 | SNARE protein Syntaxin 1 and related proteins; [U] |
| MapolyID | Mapoly0009s0005 | - |
| GO | GO:0000149 | SNARE binding |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0006906 | vesicle fusion |
| GO | GO:0012505 | endomembrane system |
| GO | GO:0031201 | SNARE complex |
| GO | GO:0006886 | intracellular protein transport |
| GO | GO:0005886 | plasma membrane |
| GO | GO:0048278 | vesicle docking |
| GO | GO:0016021 | membrane |
| GO | GO:0006887 | exocytosis |
| GO | GO:0016020 | membrane |
| GO | GO:0005484 | SNAP receptor activity |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSYP13A | Ortholog of Arabidopsis SYP13 genes | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g13190.1 GACAGGGAGG GTGGTGGCAA GCGAGGGAGC GAGCGAGCGA GGAGACGGAG GGAGGGGGCA GGAGGAGAGT GTGCAGGAAA GGGAGCTGCG TATGAAAGAG AATGGTAGTT ATAGATTTTT GTTGTTGCTC TCTGTGTTTT CGGGGCGCCG ATTTGATCGG CAGGCAGCCG GGTGGGTGTC GTGGCCAGTT GCTGACTGAC TGCATCACGC CGGGGAGTGG GATTGTTGCT GTTGCGGAGT AGGAGGCCGA ATGAAGCAGG AAAAAGCGGG AGCAGCAGGA CAGGGACCAG TGCGGCAGCA ACATTGGGTT GGGAGCGAAT TCTTCCTAGA GTTGGTTGTG TGGTGAGCAC ACTAGAAAAT TTCCGGTCAC AGCAGATTAC GGAGGAGCGG CAAGAATCAG GATTGTGACT AGGCTGCTGT TGTTGCTATT CGCCGGGTCG TCTTCTTTTG TCGTGCGCGC GGAAGCAGAC GGGGCGTGGT GCTGCTGCAA TTCGCATTCG GCAGGCACGG ATTGGAATTC CCCGGCAAGA TCATTCATAT TGAGGCGTTT TGTAGCGTTT TAGCTTGGCG GCGTCATTGC ACCTGGATTA GTGCAGGCGA GGTTATCGAA CTTTGACGCC GCTGGTTTTT TTCGCTGATA GGTGGTTCGG ATCCTGCGAG TTCCACTTCT TTCCAGCTTT GATCGTCGTA GTCTTTTTTC TACGCAGGGT TTAGTTTATT GGTCTCGACG AACAGGATAG AAATTGCGTA ATTGAATCCA GGTTCAGCAG TAAGCCAAGC AGGCGGCAAT CATGAACGAT CTTTTAGGGG TATGTGCTCC TCTCGAGTCG TCCTTATGAA TTCTGATTCT AATCATTAGC ATTGAGAGCT CAGTCGCACC GAAGGATTCA GGCGATATTC AACGAAAGCC AGCTTACGAG TGGTTCCCTC GTCAGCTTTA GGGTATTGAA GTCTGGTCTG AAAGTGACGG GAGAAGAGCG GGATATGAAG TAATCGTTAG ATTAAATTCT CACAGGACAG GCAGGGATAA TGTACAAGCT GGAAGCCAGA CCTCCTTTCA AACTCTATTT GAGCTTTAAC TTGAGACTAG GCCGATGTCT TGTGCTGTCC CGGATGCGTA TCTACAGGAA GGAGAATGAT TTTGATTTAA ATTGTGCATG CAGGAGTCCG GTCGCCACTC GACTTCAGCT CAAGACGTTA CCGGGAACGG TAGAGAGAAA AATGGCAAGG ATAATAATGA TCTTGAGGCA GGACCATCTG GAACGCCGGA TGGTGGAGCA GACATGCTTC AGTTTTTCAA CGAGGTGCGT CCAAACGCCT GCCCCATGTC GGTAGTTGTG TGGGAAGCCT CGCTTTTGTC GCTGATCGCA GTAATGAGGA GGAACAAGAG CGATCCGCTG TTCTCTAGTA TTGTCTTTTA GAACCTAGTC CTCGAGTATA ACGTTGTGAT CTGTTCTTCT GCCGACAATC TCTTCACGAA GGTCATGTCA GTCTCCCGAA TAGCGTGTGC TTTCTAATTT GTAGTTTCTT TCTTCTCACC ACAGCGTTTT TTGCGTTTGA CAGGTCGGTG TCATTAAGAC TGACATGGCA CAGATTCGAA AAAACTTGGC CAAGCTTCAG GTTGGTTATT CTTTAAGAAC CATACACGTG GCTTTTCCGG ACTTTAATGT CGCAGTTCTA GTTTTCCTGG GATGTGCTTT GACGGTGATA ATTTTTTTTT TTTTAATCAG AACGAATCAC ATGACATTTT CTCTCGTGAA TATGCATCAT GTCAAGACTT GTCTGGCATG ATGCGTATGG GCTCACAAAT TGTGTGGTAT TGGTATGTAG GATGCTCACG AGGAGACTAA AACAGTCACA AACGCCAAGG CTATGAAAGG TTGGTAGCAA GTCTGCTTCT AATTTTTATT AAGTGGTGTA TAAATTTCTC ACAATGAAAG CAATATACGA CTGCGTGTCC ATCAAATTTT ATTGATAGCG TGGGATTAGT CTGTCATCGT CCTCGTGTTT CTGAAGGAGT TTTTAAAACA AGATTTGACT GTTTATCTAG CCTTGAAAGA GCGAATGGAG AAGGACATTG ATGAAGTGAG CAAAGTCGCA CAACACATTA AAGGGAAAAT TGAAGCTCTT GATAAATCGG TACGTAAAAT ACCATTTGCA TTCAGCAACT ACAAGGCCCT AATGATGAGT CTTTTTAAGC GAAGAATGTG AACTTAATGT TTTTTTTCTT ATGACATGGT ACTCTATGTA TGTTGCAGAA TATAGCAAAC CGGAAGAAAC CAAACTGCGG TGAGGGCTCA AGTACAGATC GCACTCGGAT GTCGATGACT GCGTACGTGC TCGTCACATG TCCTTTGTCC TTGATTGGCC ACGTAAAATA TGGCTGTGAA ATCGAGTTTG CTTGTATGAT TTTTATACTT CTCTGTTGAT TCAGAATTCT TTTCCTTCAG GTATGCATAG CCAACCGTGT AGAGGTCTCT TTACTAGTAT CTGTTCTTGA TCATTGTTGT CCATTGATTG GTTGGTCTCC TTCATACTTA AAAGGGACGT AGTTCATTTT GAAGTCGTCA GTCTGTTTTC AAACAGCTGC TAATGAACAA ATTGATTGTT TACATACTTG ATTGTCACAT CTGGCTAGCT TATGAATTCC TTACCTTAAG TATGAACTCG TGCCTCATCC TTTCATCCTA ATTGCATATG TGCCAATAAC TGCCTTCAGC TAACGAGGCA AATGCTTGCT TGTCATGCGA ATTGCAGGAC CTTGAAAAAG AAGCTGAAAG AGCTGATGAC TGAATTTCAG GCAAGCAATA AAATACAAGA CCCATGTAGG GGAGCCTTAG GAAGAAGTAC CAGACACAGA AAGAAATATA TGCGGATTTG TTTCAACTTC TGTTATCTGC CTAGACGGAA TGCATTGTGG TCAGGTTTTG TAGCACCAGC ACTGCTCCAC ATTAATTTGT TCTTTTATAA TGGCTTGGGT CCCACAGGCA TTGAGGCAGA AGTTCACTGA CGAATACCGC GAAGTGGTAG AAAGACGTGT TTTTACAGGT ACTAGTTCTT TACTCTTTGA TCGGTTTCAT TGGTTGCCCC TTGAGGTTAC TTGTGCTTCC CTTGTCGTTT GATCTTGCAT ACTGGTATTT GAAAAGTTTG GGGAGGGAAC TTTGAAAGCA ATTCCTTGTA CAATGCATGA TTTCTAAGTG TAATGCATAT TACGCTCACC TTCCCACCTT ATTGTCTCTG AACCTCAACC TAAACTCTGC AAGTGATTTG TGAAGAATCT ACTTAAGAAA ATGGTTAATC GCCGACACTT GATTACACGT TGTTCTCAGC TTGACATGAC TCTGATCCTT TTTGACATCT GCTTGTGTGT AATGGACAGT AACTGGACAG AAGGCTGATG AAGGGGTAAG TAAATTTGTA ACCATACAAT CCCTAAAGAT GGCAATGACA GATGGTTTTT CTAACATATC ATGTAGTTAT CTAGCTGAAT TCGAGTTGAA GCTTGGTTCA AAGTAGGGAG TCCTACACCG AGATTTCTGC TCTGGAACTC AGGAGTATTG CTCAGAATCT ACCTGAGGGT TAGATTGTCT GTGAGCAAGC CATGGCAAGA GAGTGTACAG GACCTGCTGT GGTAGGGCAG ACAACAGTTT CGTCGAGTAC AGAAACGGGC AGTTCATGAT TGTGGTTCCG CTTTGTGGAC TGCAGACCAT TGACCAGCTG ATAGAAACTG GGGATAGTGA ACAAATTTTT CAGAAGGCCA TTCAAGAACA AGGGCGAGGC CAGGTGAGCA GGTTTAATTT TACCAGACAG CTCTTTGGTG TAAAATTCTT AGATTTAGAT AGAGTTTTAT CCTGCTTTGC TAACGTGGTG CGGTCCTGTA GATTTTGGAC ACAATTGCTG AAATTCAAGA GCGACATGAT GCCGTGAAGG ATATCGAGAA GAAACTTCTG GAACTACACC AGGTGCATAT ATATGACTTA ACTCTTGATA TGTGCCAATA GTTTTAGCAT AATTTTGCAG GGATCAATTA AATTCAAGTA TTTGGAGGGA GATTTACTTC TGGTTGTTTC GTTGTACAGA TATTTTTGGA TATGGCCGTA CTAGTTGAGG CACAGGGAGA GCTGCTCGAC AATATCGAAA CTCAGGTGTG CTGTCACATA TCTATTTTTT CTTCAGCTTA TCATGCACTA CATATGGGCC TTTTTTATGT TATGTTTTTG TCGCTATTTT TAAATAGTAA TAAGCTTACA CTGCGTCGAA AATCTTCCTT TGGGGAATAG ATGGATTCTG CCCTACAGCC CCTTTGCAGA TATGTTACCT TCTAACCTAC GAGCAATCGA TTGTACCTTC GAATGTTATA CTTAAACGCG ACTGTAAGTG GCATCTGAAG GACAGGAAGC CCATATACAA ATGTGATAAC TATTTCTCAT TTAGACATTT TGTTGACAAG CAGACATGGT ATCGTTCTAT TGCGTATGCA GGTATCAAAA GCCGTGACAT ATGTCCAAGA GGGTACAGTT GCGTTGCAGA CAGCCAAGAA GCTGCAAAGA GGCACCCGGA AGTGCATGTG TATTGCAATT ATATTGTTAC TTATCATCAT CATCATCATA GTCGTTGCGG TCGTTCAGCC TTGGAAAACA AACAAAGCAT GATAAAGCTC TGGGAGTTTG TATCCTGTGT TTGAAATTGC TATCGGCCCA TCTTGTATCT CATTCGGTTG GGTGTACAGA ATTCTCGTGT TGGAAATTTT CGAGTTTACT AACCTGCAGA AAATGCTATG TTATTTTCTT TATCTTCCTC ATGAGGTTGG TTTTGACAGG TTGGGCTTTT AGGTTGGATG GTATTTGAAT GTAGATCTTC CGGGAGGCAT TCATTGTAAA GGAAATTGCC CATGTAAAGC ATAAGGAATA GCGCATGGGC AGTCGATTCT TTAATAAAGT GTATCAAATT ATTCTTTCCA CCATATCAAA CGATATATGG TGTAAACTCA GGTGTTGGAT AAATTAACCG CCCAGGTCTG CAATGTAGAA CTTTACTGTA AGACGAGGAC ATTTGGCGCT GATTTTTTCA CACAGCTATT CTGTTTC |
mRNA UTR + CDS |
| >Mp7g13190.1 GACAGGGAGG GTGGTGGCAA GCGAGGGAGC GAGCGAGCGA GGAGACGGAG GGAGGGGGCA GGAGGAGAGT GTGCAGGAAA GGGAGCTGCG TATGAAAGAG AATGGTAGTT ATAGATTTTT GTTGTTGCTC TCTGTGTTTT CGGGGCGCCG ATTTGATCGG CAGGCAGCCG GGTGGGTGTC GTGGCCAGTT GCTGACTGAC TGCATCACGC CGGGGAGTGG GATTGTTGCT GTTGCGGAGT AGGAGGCCGA ATGAAGCAGG AAAAAGCGGG AGCAGCAGGA CAGGGACCAG TGCGGCAGCA ACATTGGGTT GGGAGCGAAT TCTTCCTAGA GTTGGTTGTG TGGTGAGCAC ACTAGAAAAT TTCCGGTCAC AGCAGATTAC GGAGGAGCGG CAAGAATCAG GATTGTGACT AGGCTGCTGT TGTTGCTATT CGCCGGGTCG TCTTCTTTTG TCGTGCGCGC GGAAGCAGAC GGGGCGTGGT GCTGCTGCAA TTCGCATTCG GCAGGGTTTA GTTTATTGGT CTCGACGAAC AGGATAGAAA TTGCGTAATT GAATCCAGGT TCAGCAGTAA GCCAAGCAGG CGGCAATCAT GAACGATCTT TTAGGGGAGT CCGGTCGCCA CTCGACTTCA GCTCAAGACG TTACCGGGAA CGGTAGAGAG AAAAATGGCA AGGATAATAA TGATCTTGAG GCAGGACCAT CTGGAACGCC GGATGGTGGA GCAGACATGC TTCAGTTTTT CAACGAGGTC GGTGTCATTA AGACTGACAT GGCACAGATT CGAAAAAACT TGGCCAAGCT TCAGGATGCT CACGAGGAGA CTAAAACAGT CACAAACGCC AAGGCTATGA AAGCCTTGAA AGAGCGAATG GAGAAGGACA TTGATGAAGT GAGCAAAGTC GCACAACACA TTAAAGGGAA AATTGAAGCT CTTGATAAAT CGAATATAGC AAACCGGAAG AAACCAAACT GCGGTGAGGG CTCAAGTACA GATCGCACTC GGATGTCGAT GACTGCGACC TTGAAAAAGA AGCTGAAAGA GCTGATGACT GAATTTCAGG CATTGAGGCA GAAGTTCACT GACGAATACC GCGAAGTGGT AGAAAGACGT GTTTTTACAG TAACTGGACA GAAGGCTGAT GAAGGGACCA TTGACCAGCT GATAGAAACT GGGGATAGTG AACAAATTTT TCAGAAGGCC ATTCAAGAAC AAGGGCGAGG CCAGATTTTG GACACAATTG CTGAAATTCA AGAGCGACAT GATGCCGTGA AGGATATCGA GAAGAAACTT CTGGAACTAC ACCAGATATT TTTGGATATG GCCGTACTAG TTGAGGCACA GGGAGAGCTG CTCGACAATA TCGAAACTCA GGTATCAAAA GCCGTGACAT ATGTCCAAGA GGGTACAGTT GCGTTGCAGA CAGCCAAGAA GCTGCAAAGA GGCACCCGGA AGTGCATGTG TATTGCAATT ATATTGTTAC TTATCATCAT CATCATCATA GTCGTTGCGG TCGTTCAGCC TTGGAAAACA AACAAAGCAT GATAAAGCTC TGGGAGTTTG TATCCTGTGT TTGAAATTGC TATCGGCCCA TCTTGTATCT CATTCGGTTG GGTGTACAGA ATTCTCGTGT TGGAAATTTT CGAGTTTACT AACCTGCAGA AAATGCTATG TTATTTTCTT TATCTTCCTC ATGAGGTTGG TTTTGACAGG TTGGGCTTTT AGGTTGGATG GTATTTGAAT GTAGATCTTC CGGGAGGCAT TCATTGTAAA GGAAATTGCC CATGTAAAGC ATAAGGAATA GCGCATGGGC AGTCGATTCT TTAATAAAGT GTATCAAATT ATTCTTTCCA CCATATCAAA CGATATATGG TGTAAACTCA GGTGTTGGAT AAATTAACCG CCCAGGTCTG CAATGTAGAA CTTTACTGTA AGACGAGGAC ATTTGGCGCT GATTTTTTCA CACAGCTATT CTGTTTC |
CDS |
| >Mp7g13190.1 ATGAACGATC TTTTAGGGGA GTCCGGTCGC CACTCGACTT CAGCTCAAGA CGTTACCGGG AACGGTAGAG AGAAAAATGG CAAGGATAAT AATGATCTTG AGGCAGGACC ATCTGGAACG CCGGATGGTG GAGCAGACAT GCTTCAGTTT TTCAACGAGG TCGGTGTCAT TAAGACTGAC ATGGCACAGA TTCGAAAAAA CTTGGCCAAG CTTCAGGATG CTCACGAGGA GACTAAAACA GTCACAAACG CCAAGGCTAT GAAAGCCTTG AAAGAGCGAA TGGAGAAGGA CATTGATGAA GTGAGCAAAG TCGCACAACA CATTAAAGGG AAAATTGAAG CTCTTGATAA ATCGAATATA GCAAACCGGA AGAAACCAAA CTGCGGTGAG GGCTCAAGTA CAGATCGCAC TCGGATGTCG ATGACTGCGA CCTTGAAAAA GAAGCTGAAA GAGCTGATGA CTGAATTTCA GGCATTGAGG CAGAAGTTCA CTGACGAATA CCGCGAAGTG GTAGAAAGAC GTGTTTTTAC AGTAACTGGA CAGAAGGCTG ATGAAGGGAC CATTGACCAG CTGATAGAAA CTGGGGATAG TGAACAAATT TTTCAGAAGG CCATTCAAGA ACAAGGGCGA GGCCAGATTT TGGACACAAT TGCTGAAATT CAAGAGCGAC ATGATGCCGT GAAGGATATC GAGAAGAAAC TTCTGGAACT ACACCAGATA TTTTTGGATA TGGCCGTACT AGTTGAGGCA CAGGGAGAGC TGCTCGACAA TATCGAAACT CAGGTATCAA AAGCCGTGAC ATATGTCCAA GAGGGTACAG TTGCGTTGCA GACAGCCAAG AAGCTGCAAA GAGGCACCCG GAAGTGCATG TGTATTGCAA TTATATTGTT ACTTATCATC ATCATCATCA TAGTCGTTGC GGTCGTTCAG CCTTGGAAAA CAAACAAAGC ATGA |
Protein |
| >Mp7g13190.1 MNDLLGESGR HSTSAQDVTG NGREKNGKDN NDLEAGPSGT PDGGADMLQF FNEVGVIKTD MAQIRKNLAK LQDAHEETKT VTNAKAMKAL KERMEKDIDE VSKVAQHIKG KIEALDKSNI ANRKKPNCGE GSSTDRTRMS MTATLKKKLK ELMTEFQALR QKFTDEYREV VERRVFTVTG QKADEGTIDQ LIETGDSEQI FQKAIQEQGR GQILDTIAEI QERHDAVKDI EKKLLELHQI FLDMAVLVEA QGELLDNIET QVSKAVTYVQ EGTVALQTAK KLQRGTRKCM CIAIILLLII IIIIVVAVVQ PWKTNKA |