Mp7g14570



Description

Annotation

Database ID Description
CDD cd17940 DEADc_DDX6
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00270 DEAD/DEAH box helicase
Coils Coil Coil
ProSiteProfiles PS51195 DEAD-box RNA helicase Q motif profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SMART SM00490 helicmild6
SMART SM00487 ultradead3
FunFam G3DSA:3.40.50.300:FF:000114 ATP-dependent RNA helicase DDX6
FunFam G3DSA:3.40.50.300:FF:000364 ATP-dependent RNA helicase DDX6
CDD cd18787 SF2_C_DEAD
Gene3D G3DSA:3.40.50.300 -
ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature.
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
PANTHER PTHR47960 DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
KEGG K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
KOG KOG0326 ATP-dependent RNA helicase; [A]
MapolyID Mapoly0009s0142 -
GO GO:0034063 stress granule assembly
GO GO:0005524 ATP binding
GO GO:0017148 negative regulation of translation
GO GO:0003724 RNA helicase activity
GO GO:0010494 cytoplasmic stress granule
GO GO:0033962 P-body assembly
GO GO:0000932 P-body
GO GO:0003729 mRNA binding
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRH8 ATP-dependent RNA helicase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g14570.1 chr7:18308238..18311796 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.