Mp8g05210



Description

Annotation

Database ID Description
ProSitePatterns PS00211 ABC transporters family signature.
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature.
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile.
Gene3D G3DSA:3.40.50.300 -
Pfam PF00005 ABC transporter
PRINTS PR01868 ABC transporter family E signature
SMART SM00382 AAA_5
CDD cd03237 ABC_RNaseL_inhibitor_domain2
SUPERFAMILY SSF54862 4Fe-4S ferredoxins
PANTHER PTHR19248 ATP-BINDING TRANSPORT PROTEIN-RELATED
FunFam G3DSA:3.40.50.300:FF:000144 ATP-binding cassette sub-family E member 1
Pfam PF04068 Possible Fer4-like domain in RNase L inhibitor, RLI
Pfam PF00037 4Fe-4S binding domain
CDD cd03236 ABC_RNaseL_inhibitor_domain1
FunFam G3DSA:3.40.50.300:FF:000152 ATP-binding cassette, sub-family E, member 1
KEGG K06174 ATP-binding cassette, sub-family E, member 1
KOG KOG0063 RNAse L inhibitor, ABC superfamily; [A]
MapolyID Mapoly0081s0022 -
GO GO:0005506 iron ion binding
GO GO:0043024 ribosomal small subunit binding
GO GO:0005524 ATP binding
GO GO:0000054 ribosomal subunit export from nucleus
GO GO:0016887 ATP hydrolysis activity
GO GO:0006415 translational termination
GO GO:0006413 translational initiation

Nomenclature

Gene symbol Product Transcript ID Status
MpABCE2 ABC transporters Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05210.1 chr8:7317322..7322215 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g05210.2 chr8:7317322..7322215 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.