| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Coils | Coil | Coil |
| Pfam | PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| CDD | cd12411 | RRM_ist3_like |
| PANTHER | PTHR45880 | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 |
| Pfam | PF00076 | RNA recognition motif |
| SMART | SM00356 | c3hfinal6 |
| Gene3D | G3DSA:4.10.1000.10 | - |
| SMART | SM00360 | rrm1_1 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD |
| Gene3D | G3DSA:3.30.70.330 | - |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| KEGG | K13107 | RNA-binding motif protein, X-linked 2 |
| KOG | KOG0126 | Predicted RNA-binding protein (RRM superfamily); [R] |
| KOG | KOG0147 | Transcriptional coactivator CAPER (RRM superfamily); C-term missing; [K] |
| MapolyID | Mapoly0013s0140 | - |
| GO | GO:0003723 | RNA binding |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0071011 | precatalytic spliceosome |
| GO | GO:0071013 | catalytic step 2 spliceosome |
| GO | GO:0005686 | U2 snRNP |
| GO | GO:0000398 | mRNA splicing, via spliceosome |
| GO | GO:0003676 | nucleic acid binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H32 | transcription factor, C3H | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g06500.1 AACTGAAGAT ATTTACGTGG TACTCAGTAG GTTCTTCTGC GACTCAAATG TCACATCGAA GGGTTCATGA AAGCAATAAT ACTGAATGTC GAAGCGCCTA CGCTGGGGTA ACCCTTAGCA AGAGAAGGCG AGGCGAGAAG GTCCGGACAG ACCACAACGG TGTTCGGACA CGAAATTACA CGTCCACACG AGTCTTTGGT TCGAAGCCTT ACGTTGGTGA ACGTGACGAT GGAACGGGAT TTGAAACTAG GGAAAGTCGA CACTAGAACG ACAATCCTTT GATCGGAACG TGCATTTCAG TATGACCCGG ATTGGTATAT AATTTACTGC CGACAACTGT TGTGGACATG AGTCGGTAGA TAGACAGGGA GAGAGAGCGG GAACACATGA ACTGCAAAAT CTGAGAAATC ATGAATCCTC TCACGCAAGT GAAGAATACT CAGAAAATCA CCGCACGAGA GGCAGCAGCA GGGATCTCAG AGCAGGGTTC TTGGCACGAG CGATATAAGG ACTCAGCTTA CATCTACATC GGTGGGCTGC CTTTTGATCT CACTGAGGGT GATCTCCTCG CCGTTTTCGC CCAGTGAGTT TCTGAACGCC TCTCGATTCC TTTTCCAGTT GCTTTGTGTT CAGCTTGTCA TGACCTAAAT TTTAGTCTTG TGAAACAATC TCCTGGTGAG CCACATTTTA CTATGCAGTC ATCGCGTGAT AGTTTTCCAG TGATTTCCCC GGGATCTTGG TGTTAGGCTT CAGCTGAAAT ATTGCCACAC AACGATTTTA CACGATTTTT CTCTTTCGTC TGACCCGGAA GTGACGATTT CGATGCAGGT ATGGCGAAAT TGTGGATGTG AATCTGGTGA GAGACAAGGG AACCGGAAAG TCCAAGGGTT TTGCTTTCGT GGCTTACGAG AATCAAAAAA GCACCATACT TGCAGTTGGT AAGTTCTCTG TACTCACGTT TATACGTTTG GAAAGCTAAC AGAGTCCCGC AGAAACTGTA GGGCGATCTT TCAAAGCTAA CGATTTCAAA CATCTCGACT CCTTTTCTGG TCTGTGCTCT CACCATGTTG CTACGTCTCT GAATTAAAGC GACATGTACT TCTGTGCTAC AGATAATCTG AATGGGGCGA GAGTAATCGG ACGCATTATT CGTGTGGACC ATGTTGTGAA TTACAAGAAG AAAAAGGAAG AAGATGAGGA GGAGGAACAA CGCAAGAGAG AAGAACGGGG CGTTTGCTAT GCTTTCCAGC GTGGAGAGTG CAACCGAGGA GCTGGTTGCA AATTTTCCCA TGATGAGCAG GTATATTCTG CTACAGTTCT TCCAGCTGCG TGTATTTCCG TGATGTCTCA AGCCAATCGG GCACAATCGG GCCAAGCCAG CTATTGACAC AGACATGACA AATGAAAGCC TATTCTCTGT CTCTAGAATC CCATACGTAA AAAGCATATA TACGGCGACC TGCTTCAGAT TGTACAGTTA TAGATACCTC TATTTGGCGA ACCCTTTGGC CTTTGCTACC CGAAACCTCT GGACTGGTTG GATTAGCCTG ACGTTGCATA TCATGATCCT TATGTGAGCA TGTCCAGAAG CACGAGGTTG GGACCATGGG TGTTGCCGGC TCGGTGTTTG TGGGCTTCTG GTGGTTCCTT AGCTGTGTTG CACTTATTCA ATGATTGATT CTTAGATTGT CATCATAATA TGTGAATCAA ATCCTGCCAG CTGTGCCCAT CTCTGCTAAC CTCGTCCTTG TTCTCGTTCT TTGAGCACTT TGTGAGGATA TTGTTGACAG GGTTTTAATT TGCGCACAAC GAAATAATCT TATCCGTCAG TCAGCTTGGC TAATTGCCAT GCTTATGTTC TAAGAACAGC CTTAACGCTT TGAAATGCTT TTTTCCACAG AGGAATGCTA ATACTGGATG GGGCAAGAAA GAGGATGGGC CAACATTCGG TAAGAAAGAA GGTGGTAACA GAAGGAGGGA TGATGGACCA CCTGCTCCAC CACCTTGGAG ACGGGAGAAG AAGAACGATG ACCCCCCACC ATCGAGACCA GGGGTACAAG TGTTTGACCG GGCCAGCAAA GATAATACCA CTGGAATAGA TACAAAGGGC TCTGAAGGCG GTTTCAAAAG ACGAATGGAA GTTGACGGTG GCAGGGTAGG AAGAGACATT CGGCCTAAAG ATGAGAACGA TAGCGATAGA GGAAGGGATG CTCGTGGTAA CGATGCCAAA GATATGTATT CTAGGGACAG AGAGGATGGA ATGAGTTCCA GACGGGAACG GGCCGAAGGA AGAGGTTTTC GAGATGAGCC ATATGAATCT AGAGAGCGAG ATGGCTCGTC TAGAGCTGAC AGAGGAGGAG GGAGGAGAGA AGAACGAGAT GGAGGAAGAA GTGGAAGAGG TGGACGAGAC GAAATTGACG GAGGAAGAGG GTCGAGAGAT ACAAGGGACG ATGGTGGCAG AGGTCATAGA GGTGAAAGGG ACGATGGTGG CCGAGCATAC AAGGATGAAC TAAATGCTGG TGGCCATAAA AGTGGTCGTT TTAGCGATGG TTATTCTAGG AGATAACAGA CCTGAATGGA AGATAGTGAA GCTTCTCTGT ACGTAGTGCA ATGCGATGTA GACAGGGTTG TTGTTCATCC ATTGTGCTCA AAGCTTTGAG AAATGTGCTT GTCAAAGGTT CATGATGAAT GGAGAGTTTC ACGTTGGGAA GAGCTTTGTC AAGACTTGCA TGACGACACA GCTTGTGCAG GCTTAGCGGC AGGCAACTCA GAGTGTACGA TATTGAGTCT GCCATGAACC CAGAGTTCTT GCTGCAACAA GAAATACATT TCTCCCAGTA ATTGTATATC TACCTTCTGA TTTTACCTCT CTCTGTTCAG CAGCTTGCAA CCAATCGGAC ACTGAAGCTT ACTGGTGTGA AAATAGCTGA AAAGTCCACA ACCTCGAAGT AAGCAATGTA ACCGAAGTAC GTAGAATCTT TCTATTGACG TCCTGTTTGT TATGCACGAG ATTCAACTCG ACTCATAACG AGAGCACTGA CAATGGAATA ATTCATGTCA ATATTTTCTG G |
mRNA UTR + CDS |
| >Mp8g06500.1 AACTGAAGAT ATTTACGTGG TACTCAGTAG GTTCTTCTGC GACTCAAATG TCACATCGAA GGGTTCATGA AAGCAATAAT ACTGAATGTC GAAGCGCCTA CGCTGGGGTA ACCCTTAGCA AGAGAAGGCG AGGCGAGAAG GTCCGGACAG ACCACAACGG TGTTCGGACA CGAAATTACA CGTCCACACG AGTCTTTGGT TCGAAGCCTT ACGTTGGTGA ACGTGACGAT GGAACGGGAT TTGAAACTAG GGAAAGTCGA CACTAGAACG ACAATCCTTT GATCGGAACG TGCATTTCAG TATGACCCGG ATTGGTATAT AATTTACTGC CGACAACTGT TGTGGACATG AGTCGGTAGA TAGACAGGGA GAGAGAGCGG GAACACATGA ACTGCAAAAT CTGAGAAATC ATGAATCCTC TCACGCAAGT GAAGAATACT CAGAAAATCA CCGCACGAGA GGCAGCAGCA GGGATCTCAG AGCAGGGTTC TTGGCACGAG CGATATAAGG ACTCAGCTTA CATCTACATC GGTGGGCTGC CTTTTGATCT CACTGAGGGT GATCTCCTCG CCGTTTTCGC CCAGTATGGC GAAATTGTGG ATGTGAATCT GGTGAGAGAC AAGGGAACCG GAAAGTCCAA GGGTTTTGCT TTCGTGGCTT ACGAGAATCA AAAAAGCACC ATACTTGCAG TTGATAATCT GAATGGGGCG AGAGTAATCG GACGCATTAT TCGTGTGGAC CATGTTGTGA ATTACAAGAA GAAAAAGGAA GAAGATGAGG AGGAGGAACA ACGCAAGAGA GAAGAACGGG GCGTTTGCTA TGCTTTCCAG CGTGGAGAGT GCAACCGAGG AGCTGGTTGC AAATTTTCCC ATGATGAGCA GAGGAATGCT AATACTGGAT GGGGCAAGAA AGAGGATGGG CCAACATTCG GTAAGAAAGA AGGTGGTAAC AGAAGGAGGG ATGATGGACC ACCTGCTCCA CCACCTTGGA GACGGGAGAA GAAGAACGAT GACCCCCCAC CATCGAGACC AGGGGTACAA GTGTTTGACC GGGCCAGCAA AGATAATACC ACTGGAATAG ATACAAAGGG CTCTGAAGGC GGTTTCAAAA GACGAATGGA AGTTGACGGT GGCAGGGTAG GAAGAGACAT TCGGCCTAAA GATGAGAACG ATAGCGATAG AGGAAGGGAT GCTCGTGGTA ACGATGCCAA AGATATGTAT TCTAGGGACA GAGAGGATGG AATGAGTTCC AGACGGGAAC GGGCCGAAGG AAGAGGTTTT CGAGATGAGC CATATGAATC TAGAGAGCGA GATGGCTCGT CTAGAGCTGA CAGAGGAGGA GGGAGGAGAG AAGAACGAGA TGGAGGAAGA AGTGGAAGAG GTGGACGAGA CGAAATTGAC GGAGGAAGAG GGTCGAGAGA TACAAGGGAC GATGGTGGCA GAGGTCATAG AGGTGAAAGG GACGATGGTG GCCGAGCATA CAAGGATGAA CTAAATGCTG GTGGCCATAA AAGTGGTCGT TTTAGCGATG GTTATTCTAG GAGATAACAG ACCTGAATGG AAGATAGTGA AGCTTCTCTG TACGTAGTGC AATGCGATGT AGACAGGGTT GTTGTTCATC CATTGTGCTC AAAGCTTTGA GAAATGTGCT TGTCAAAGGT TCATGATGAA TGGAGAGTTT CACGTTGGGA AGAGCTTTGT CAAGACTTGC ATGACGACAC AGCTTGTGCA GGCTTAGCGG CAGGCAACTC AGAGTGTACG ATATTGAGTC TGCCATGAAC CCAGAGTTCT TGCTGCAACA AGAAATACAT TTCTCCCAGT AATTGTATAT CTACCTTCTG ATTTTACCTC TCTCTGTTCA GCAGCTTGCA ACCAATCGGA CACTGAAGCT TACTGGTGTG AAAATAGCTG AAAAGTCCAC AACCTCGAAG TAAGCAATGT AACCGAAGTA CGTAGAATCT TTCTATTGAC GTCCTGTTTG TTATGCACGA GATTCAACTC GACTCATAAC GAGAGCACTG ACAATGGAAT AATTCATGTC AATATTTTCT GG |
CDS |
| >Mp8g06500.1 ATGAATCCTC TCACGCAAGT GAAGAATACT CAGAAAATCA CCGCACGAGA GGCAGCAGCA GGGATCTCAG AGCAGGGTTC TTGGCACGAG CGATATAAGG ACTCAGCTTA CATCTACATC GGTGGGCTGC CTTTTGATCT CACTGAGGGT GATCTCCTCG CCGTTTTCGC CCAGTATGGC GAAATTGTGG ATGTGAATCT GGTGAGAGAC AAGGGAACCG GAAAGTCCAA GGGTTTTGCT TTCGTGGCTT ACGAGAATCA AAAAAGCACC ATACTTGCAG TTGATAATCT GAATGGGGCG AGAGTAATCG GACGCATTAT TCGTGTGGAC CATGTTGTGA ATTACAAGAA GAAAAAGGAA GAAGATGAGG AGGAGGAACA ACGCAAGAGA GAAGAACGGG GCGTTTGCTA TGCTTTCCAG CGTGGAGAGT GCAACCGAGG AGCTGGTTGC AAATTTTCCC ATGATGAGCA GAGGAATGCT AATACTGGAT GGGGCAAGAA AGAGGATGGG CCAACATTCG GTAAGAAAGA AGGTGGTAAC AGAAGGAGGG ATGATGGACC ACCTGCTCCA CCACCTTGGA GACGGGAGAA GAAGAACGAT GACCCCCCAC CATCGAGACC AGGGGTACAA GTGTTTGACC GGGCCAGCAA AGATAATACC ACTGGAATAG ATACAAAGGG CTCTGAAGGC GGTTTCAAAA GACGAATGGA AGTTGACGGT GGCAGGGTAG GAAGAGACAT TCGGCCTAAA GATGAGAACG ATAGCGATAG AGGAAGGGAT GCTCGTGGTA ACGATGCCAA AGATATGTAT TCTAGGGACA GAGAGGATGG AATGAGTTCC AGACGGGAAC GGGCCGAAGG AAGAGGTTTT CGAGATGAGC CATATGAATC TAGAGAGCGA GATGGCTCGT CTAGAGCTGA CAGAGGAGGA GGGAGGAGAG AAGAACGAGA TGGAGGAAGA AGTGGAAGAG GTGGACGAGA CGAAATTGAC GGAGGAAGAG GGTCGAGAGA TACAAGGGAC GATGGTGGCA GAGGTCATAG AGGTGAAAGG GACGATGGTG GCCGAGCATA CAAGGATGAA CTAAATGCTG GTGGCCATAA AAGTGGTCGT TTTAGCGATG GTTATTCTAG GAGATAA |
Protein |
| >Mp8g06500.1 MNPLTQVKNT QKITAREAAA GISEQGSWHE RYKDSAYIYI GGLPFDLTEG DLLAVFAQYG EIVDVNLVRD KGTGKSKGFA FVAYENQKST ILAVDNLNGA RVIGRIIRVD HVVNYKKKKE EDEEEEQRKR EERGVCYAFQ RGECNRGAGC KFSHDEQRNA NTGWGKKEDG PTFGKKEGGN RRRDDGPPAP PPWRREKKND DPPPSRPGVQ VFDRASKDNT TGIDTKGSEG GFKRRMEVDG GRVGRDIRPK DENDSDRGRD ARGNDAKDMY SRDREDGMSS RRERAEGRGF RDEPYESRER DGSSRADRGG GRREERDGGR SGRGGRDEID GGRGSRDTRD DGGRGHRGER DDGGRAYKDE LNAGGHKSGR FSDGYSRR |