Mp8g07310



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd16100 ARID
SMART SM00501 bright_3
CDD cd06464 ACD_sHsps-like
SUPERFAMILY SSF46774 ARID-like
FunFam G3DSA:1.10.150.60:FF:000018 AT-rich interactive domain-containing protein 3
Coils Coil Coil
ProSiteProfiles PS51011 ARID domain profile.
SMART SM01014 ARID_2
Gene3D G3DSA:2.60.40.790 -
PANTHER PTHR15348 AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
ProSiteProfiles PS01031 Small heat shock protein (sHSP) domain profile.
SUPERFAMILY SSF49764 HSP20-like chaperones
Pfam PF01388 ARID/BRIGHT DNA binding domain
Gene3D G3DSA:1.10.150.60 -
KOG KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain; N-term missing; [K]
MapolyID Mapoly0013s0062 -
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpARID1 transcription factor, ARID Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g07310.1 chr8:9794854..9804082 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g07310.2 chr8:9794718..9804082 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.