Mp8g08970



Description

Annotation

Database ID Description
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF48452 TPR-like
PANTHER PTHR47643 TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710)
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50280 SET domain profile.
Pfam PF00856 SET domain
CDD cd20071 SET_SMYD
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
SMART SM00317 set_7
SUPERFAMILY SSF82199 SET domain
Pfam PF13181 Tetratricopeptide repeat
SMART SM00028 tpr_5
KOG KOG0543 FKBP-type peptidyl-prolyl cis-trans isomerase; N-term missing; C-term missing; [O]
KOG KOG2084 Predicted histone tail methylase containing SET domain; N-term missing; C-term missing; [B]
MapolyID Mapoly0063s0022 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR12 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g08970.1 chr8:11895647..11898224 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.