Mp8g12560



Description

Annotation

Database ID Description
NCBIfam TIGR00231 small GTP-binding protein domain
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00177 arf_sub_2
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR11711 ADP RIBOSYLATION FACTOR-RELATED
Pfam PF00025 ADP-ribosylation factor family
SMART SM00178 sar_sub_1
FunFam G3DSA:3.40.50.300:FF:000728 ADP-ribosylation factor-like protein 5
ProSiteProfiles PS51419 small GTPase Rab1 family profile.
SMART SM00175 rab_sub_5
CDD cd04153 Arl5_Arl8
ProSiteProfiles PS51417 small GTPase Arf family profile.
PRINTS PR00328 GTP-binding SAR1 protein signature
KEGG K07950 ADP-ribosylation factor-like protein 5B
KOG KOG0070 GTP-binding ADP-ribosylation factor Arf1; [U]
MapolyID Mapoly0083s0064 -
GO GO:0003924 GTPase activity
GO GO:0016192 vesicle-mediated transport
GO GO:0005802 trans-Golgi network
GO GO:0005525 GTP binding
GO GO:1903292 protein localization to Golgi membrane
GO GO:0006886 intracellular protein transport
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpARFC1 SAR/ARF GTPase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g12560.1 chr8:16401294..16404018 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g12560.2 chr8:16401291..16403931 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.