Mp8g14970



Description

Annotation

Database ID Description
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
Pfam PF05183 RNA dependent RNA polymerase
PANTHER PTHR23079 RNA-DEPENDENT RNA POLYMERASE
Pfam PF00076 RNA recognition motif
Gene3D G3DSA:3.30.70.330 -
SUPERFAMILY SSF54928 RNA-binding domain, RBD
CDD cd00590 RRM_SF
KEGG K11699 RNA-dependent RNA polymerase [EC:2.7.7.48]
KOG KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [A]
MapolyID Mapoly0151s0009 -
GO GO:0003723 RNA binding
GO GO:0030422 siRNA processing
GO GO:0003968 RNA-dependent RNA polymerase activity
GO GO:0031380 nuclear RNA-directed RNA polymerase complex
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRDR5/6-2 siRNA biogenesis, RNA-dependent RNA polymerase Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14970.1 chr8:19119062..19124900 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.