MpUg00470



Description

Annotation

Database ID Description
SMART SM00525 ccc3
SMART SM00478 endo3end
Pfam PF15628 RRM in Demeter
Gene3D G3DSA:1.10.340.30 Hypothetical protein; domain 2
CDD cd00056 ENDO3c
Gene3D G3DSA:1.10.1670.10 -
PANTHER PTHR46213 TRANSCRIPTIONAL ACTIVATOR DEMETER
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF48150 DNA-glycosylase
KOG KOG1921 Endonuclease III; N-term missing; [L]
KOG KOG2875 8-oxoguanine DNA glycosylase; N-term missing; C-term missing; [L]
MapolyID Mapoly0018s0032 -
GO GO:0035514 DNA demethylase activity
GO GO:0003824 catalytic activity
GO GO:0006284 base-excision repair
GO GO:0080111 obsolete DNA demethylation
GO GO:0051539 4 iron, 4 sulfur cluster binding
GO GO:0019104 DNA N-glycosylase activity
GO GO:0006281 DNA repair

Nomenclature

Gene symbol Product Transcript ID Status
MpROS1x DNA demethylase, DNA glycosylase/lyase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
MpUg00470.1 chrU:5502195..5509417 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.