MpVg00300



Description

Annotation

Database ID Description
ProSiteProfiles PS51320 Tify domain profile.
Pfam PF06203 CCT motif
Gene3D G3DSA:3.30.50.10 -
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46125 GATA TRANSCRIPTION FACTOR 28
Pfam PF06200 tify domain
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
ProSitePatterns PS00344 GATA-type zinc finger domain.
SMART SM00979 tify_2
CDD cd00202 ZnF_GATA
ProSiteProfiles PS51017 CCT domain profile.
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
Pfam PF00320 GATA zinc finger
SMART SM00401 GATA_3
KEGG K13464 jasmonate ZIM domain-containing protein
KOG KOG1601 GATA-4/5/6 transcription factors; N-term missing; C-term missing; [K]
MapolyID MapolyY_B0021 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0005515 protein binding
GO GO:0043565 sequence-specific DNA binding
GO GO:0008270 zinc ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA6 transcription factor, GATA Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
MpVg00300.1 chrV:1852638..1879408 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00300.2 chrV:1852638..1879408 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.