MpVg00340



Description

Annotation

Database ID Description
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SMART SM00353 finulus
PANTHER PTHR11514 MYC
Pfam PF14215 bHLH-MYC and R2R3-MYB transcription factors N-terminal
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00010 Helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 -
CDD cd11449 bHLH_AtAIB_like
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
KEGG K13422 transcription factor MYC2
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID MapolyY_B0018 -
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000976 transcription cis-regulatory region binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH46 transcription factor, bHLH Published
MpMYCY MYC transcription factor Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
MpVg00340.1 chrV:2004740..2037520 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00340.2 chrV:2004445..2037547 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00340.3 chrV:2004445..2037547 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.