Mp2g15420
Description
Annotation
| Database | ID | Description |
|---|---|---|
| FunFam | G3DSA:1.10.3460.10:FF:000004 | Chlorophyll a-b binding protein, chloroplastic |
| Gene3D | G3DSA:1.10.3460.10 | Chlorophyll a/b binding protein domain |
| KEGG | K08907 | light-harvesting complex I chlorophyll a/b binding protein 1 |
| PANTHER | PTHR21649 | CHLOROPHYLL A/B BINDING PROTEIN |
| Pfam | PF00504 | Chlorophyll A-B binding protein |
| SUPERFAMILY | SSF103511 | Chlorophyll a-b binding protein |
| GO | GO:0009416 | response to light stimulus |
| GO | GO:0009768 | photosynthesis, light harvesting in photosystem I |
| GO | GO:0016020 | membrane |
| GO | GO:0009765 | photosynthesis, light harvesting |
| MapolyID | Mapoly0082s0040 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining)
Light-harvesting complex A1 (LHCA1), used as a citrine-tagged plastid marker to validate the rapid plastid isolation protocol. Colocalisation of the reporter with chlorophyll autofluorescence confirmed the purified fraction was intact plastids.
0 core 1 peripheral
Raval PK, Mitchell C, Lozano-Quiles M, O'Keefe S, Nyman TA, Battersby B, Butcher SJ, Gould SB. (2026)
· bioRxiv research experimental tool
Light-harvesting complex A1 (LHCA1), used as a citrine-tagged plastid marker to validate the rapid plastid isolation protocol. Colocalisation of the reporter with chlorophyll autofluorescence confirmed the purified fraction was intact plastids.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g15420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g15420.1 CTCAAACATT CATCCGACCC GCAGCTTCCA AGGGCTTGAG ATCCTCCTCT CTCCGCTAAG GCACGCGCAG TTCGTGTGTT GTTCTCCATC GCCTTGCAAG GTCAGCACCA ACAGCAGCAG CAGCAGCAGC GGAGCAAGTT TTCGCGACAA TGGCAGCTGC TACCATGGCG TGCGTAGGTC TCTCAGCCCC CGCCCTGCTC AGCGGAGCGC AGAGGACCAA GTTCTTCAGC GGTCACGTCT CGTCCCTCTC GACCGTGAGC AATGGCAGCA GAGTGTCCAT GTCCTCCGAG TGGATGCCCG GCCAGCCCCG CCCCGCCTAC CTCGATGGAT CGTCCCCAGG GTAGGCGTTT CAATGACTTC TGGCTTATAC CGTCCTTGGA GTTCAATTGC GTCTGATAAA CTCGCCGGGG AAGGGCCGCA TTTCTCGTTC TGTCTAATTG CCTTGTGAAT TTCGGAGTTT ATGTTGGGAG TTAGTGTTTC TGTCGAGATG TTTTCAGTTG ACCCGCCGTC GGTCATGTGA ATTCTGCCGT CTCCCTGCCG TCGACAAGAG TTGGAAATTG ACGGAGCTGT ATTGAAATCT CAGAGACTTC GGATTCGACC CTCTCGGTCT TGCTGAGGTT CCAGAGAACT TCGCCCGGTA CAAAGAGTCA GAGCTCATCC ACTGCCGATG GGCCATGCTC GCAGTGGTGA GTGCAATCTC ATGTGCTTTT GTTTTCTGTT CTGCATTATA GATTGTACAT AAGGGGGTTT TTTTATGTGT CCATGTCTGA TCTTCAGTCT GTTACGTCTG CAGCCCGGTG TCCTGATCCC TGAGGCTCTT GGTCTCGGAA ACTGGGTGTC AGCCCAGCAA TGGGCCGCCA CCCCCGGCGG TCAAGCAACT TACCTTGGTA ACCCCGTTCC ATGGGGCACC CTTCCCATCA TCCTCGCTAT CGAGTTCCTC GCCGTTGCTT TCGTCGAGGC CAAGAGGGGG GAGGAGCCCG ACCACGAGAA GAGGAAGTAC CCAGGAGGCC CATTCGACCC TCTGGGTTTC GCCAAGGACC CCAAGAAGCT CGAGGAGTAC AAGCTCAAGG AGCTCAAGAA TGGTAAGGAA GCCTACATTG GTGGACTTTC TATATTTTAA AGGGATCTTA TCCCATCGGG TGACACTGTA TTAATCTAAT AGCTAACGCG TCGATACTTT GTAGCTATGT CTGTCGACAT TTGAGATTGG CCATTGCCCA ATCATATTTG ACGCTGGATC TTCGCACTTC AAACTTAGAG GTATGCAAAT CTTCCGGCAT TGTTTAATTC TGATTGTGTT TTCTGTGCGA TATGCAGGTC GTCTCGCTCT TCTTGCTTTC TTGGGATTCT CTGTCCAGGC CATCGCCTAC CCCGGAACCG GACCCCTGGA GAACTTGGCC AGCCACCTGT CCAACCCATG GGCCAACAAC ATTGCCAACA TCATCATCCC ACGATCCGTC TTGTAGATTG TAGTGTATCG CTCAAAATGC CACAATAGTT AGAACAACTT TTTCGCTGTA ATATTCTTAT CGGTGGAACT ACATTGTACA ATTTCTGCTT CGGGTCTCCG AAGGCTCATG GCCTCGGAGC GCATGTTTCA TTAGTCGAAA TGACGCTTTT CACTGTCATC CTGACAGTCA GCCGTCTTCC CTTTCAAGGA TGTGTATCGT GAAGAGATGG AAATCATCAA ATTTACAATT CATGT |
mRNA UTR + CDS |
| >Mp2g15420.1 CTCAAACATT CATCCGACCC GCAGCTTCCA AGGGCTTGAG ATCCTCCTCT CTCCGCTAAG GCACGCGCAG TTCGTGTGTT GTTCTCCATC GCCTTGCAAG GTCAGCACCA ACAGCAGCAG CAGCAGCAGC GGAGCAAGTT TTCGCGACAA TGGCAGCTGC TACCATGGCG TGCGTAGGTC TCTCAGCCCC CGCCCTGCTC AGCGGAGCGC AGAGGACCAA GTTCTTCAGC GGTCACGTCT CGTCCCTCTC GACCGTGAGC AATGGCAGCA GAGTGTCCAT GTCCTCCGAG TGGATGCCCG GCCAGCCCCG CCCCGCCTAC CTCGATGGAT CGTCCCCAGG AGACTTCGGA TTCGACCCTC TCGGTCTTGC TGAGGTTCCA GAGAACTTCG CCCGGTACAA AGAGTCAGAG CTCATCCACT GCCGATGGGC CATGCTCGCA GTGCCCGGTG TCCTGATCCC TGAGGCTCTT GGTCTCGGAA ACTGGGTGTC AGCCCAGCAA TGGGCCGCCA CCCCCGGCGG TCAAGCAACT TACCTTGGTA ACCCCGTTCC ATGGGGCACC CTTCCCATCA TCCTCGCTAT CGAGTTCCTC GCCGTTGCTT TCGTCGAGGC CAAGAGGGGG GAGGAGCCCG ACCACGAGAA GAGGAAGTAC CCAGGAGGCC CATTCGACCC TCTGGGTTTC GCCAAGGACC CCAAGAAGCT CGAGGAGTAC AAGCTCAAGG AGCTCAAGAA TGGTCGTCTC GCTCTTCTTG CTTTCTTGGG ATTCTCTGTC CAGGCCATCG CCTACCCCGG AACCGGACCC CTGGAGAACT TGGCCAGCCA CCTGTCCAAC CCATGGGCCA ACAACATTGC CAACATCATC ATCCCACGAT CCGTCTTGTA GATTGTAGTG TATCGCTCAA AATGCCACAA TAGTTAGAAC AACTTTTTCG CTGTAATATT CTTATCGGTG GAACTACATT GTACAATTTC TGCTTCGGGT CTCCGAAGGC TCATGGCCTC GGAGCGCATG TTTCATTAGT CGAAATGACG CTTTTCACTG TCATCCTGAC AGTCAGCCGT CTTCCCTTTC AAGGATGTGT ATCGTGAAGA GATGGAAATC ATCAAATTTA CAATTCATGT |
CDS |
| >Mp2g15420.1 ATGGCAGCTG CTACCATGGC GTGCGTAGGT CTCTCAGCCC CCGCCCTGCT CAGCGGAGCG CAGAGGACCA AGTTCTTCAG CGGTCACGTC TCGTCCCTCT CGACCGTGAG CAATGGCAGC AGAGTGTCCA TGTCCTCCGA GTGGATGCCC GGCCAGCCCC GCCCCGCCTA CCTCGATGGA TCGTCCCCAG GAGACTTCGG ATTCGACCCT CTCGGTCTTG CTGAGGTTCC AGAGAACTTC GCCCGGTACA AAGAGTCAGA GCTCATCCAC TGCCGATGGG CCATGCTCGC AGTGCCCGGT GTCCTGATCC CTGAGGCTCT TGGTCTCGGA AACTGGGTGT CAGCCCAGCA ATGGGCCGCC ACCCCCGGCG GTCAAGCAAC TTACCTTGGT AACCCCGTTC CATGGGGCAC CCTTCCCATC ATCCTCGCTA TCGAGTTCCT CGCCGTTGCT TTCGTCGAGG CCAAGAGGGG GGAGGAGCCC GACCACGAGA AGAGGAAGTA CCCAGGAGGC CCATTCGACC CTCTGGGTTT CGCCAAGGAC CCCAAGAAGC TCGAGGAGTA CAAGCTCAAG GAGCTCAAGA ATGGTCGTCT CGCTCTTCTT GCTTTCTTGG GATTCTCTGT CCAGGCCATC GCCTACCCCG GAACCGGACC CCTGGAGAAC TTGGCCAGCC ACCTGTCCAA CCCATGGGCC AACAACATTG CCAACATCAT CATCCCACGA TCCGTCTTGT AG |
Protein |
| >Mp2g15420.1 MAAATMACVG LSAPALLSGA QRTKFFSGHV SSLSTVSNGS RVSMSSEWMP GQPRPAYLDG SSPGDFGFDP LGLAEVPENF ARYKESELIH CRWAMLAVPG VLIPEALGLG NWVSAQQWAA TPGGQATYLG NPVPWGTLPI ILAIEFLAVA FVEAKRGEEP DHEKRKYPGG PFDPLGFAKD PKKLEEYKLK ELKNGRLALL AFLGFSVQAI AYPGTGPLEN LASHLSNPWA NNIANIIIPR SVL |