Genomic fasta file JGI 3.1 (JGI 3.1, 2957 contigs)
[Download] (gz compressed, 61.6 Mbyte)
Genomic fasta file JGI 0.6 (JGI 0.6, 4447 contigs)
[Download] (gz compressed, 63.6 Mbyte)
Function information for each gene/transcript in a tab-separated table.
Functional annotation for each gene
[Download] (gz compressed, 895.6 kbyte)
Functional annotation for each transcript
[Download] (gz compressed, 960.8 kbyte)
Same as above, in a different format (one transcript per line)
[Download] (gz compressed, 743.1 kbyte)
'All transcripts' contain all predicted transcripts including splice variants. 'Primary transcripts' contain only representative transcripts from each gene locus (i.e. splice variants is not included).
| All transcripts | Primary transcripts | Alternative transcripts | |
| Gene structure (GFF format) |
Download (2.1 Mbyte) | Download (2.2 Mbyte) | Download (763.4 kbyte) |
| Gene sequences (UTR + CDS + intron) (Fasta format) |
Download
(22.2 Mbyte)
Download (with annotation, 24.0 Mbyte) |
Download
(19.8 Mbyte)
Download (with annotation, 21.5 Mbyte) |
Download
(6.4 Mbyte)
Download (with annotation, 6.9 Mbyte) |
| mRNA sequences (UTR + CDS) (Fasta format) |
Download
(14.1 Mbyte)
Download (with annotation, 15.4 Mbyte) |
Download
(12.9 Mbyte)
Download (with annotation, 13.7 Mbyte) |
Download
(3.2 Mbyte)
Download (with annotation, 3.4 Mbyte) |
| Coding sequences (Fasta format) |
Download
(7.8 Mbyte)
Download (with annotation, 8.5 Mbyte) |
Download
(7.3 Mbyte)
Download (with annotation, 8.0 Mbyte) |
Download
(1.7 Mbyte)
Download (with annotation, 1.9 Mbyte) |
| Protein sequences (Fasta format) |
Download
(5.0 Mbyte)
Download (with annotation, 5.7 Mbyte) |
Download
(4.7 Mbyte)
Download (with annotation, 5.5 Mbyte) |
Download
(1.1 Mbyte)
Download (with annotation, 1.3 Mbyte) |