Alternative splicing factor SRp20/9G8 (RRM superfamily)
Database | ID | Description |
---|---|---|
GO | GO:0008270 | zinc ion binding |
PFAM | PF00098 | Zinc knuckle |
KOG | KOG0107 | Alternative splicing factor SRp20/9G8 (RRM superfamily) |
GO | GO:0003676 | nucleic acid binding |
PANTHER | PTHR10548 | SPLICING FACTOR, ARGININE/SERINE-RICH |
PFAM | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
No gene symbols are registered for this gene.
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0071s0008.1 TGGTTTGAGA AGTGAAGCGA GTGGTGGGTC GATTTGACTT CACTTGTGTG CTTCGTTGAA GAGGTTTTGG AGTTCGGAGT CCTGAACTTG GTTACGAGTT GGAGGTGGTA CGAGCAGTAA GCGAGCAGGC TGGCCATGTC GCGTGTTTAC GTGGGGAACC TAGATCCCCG GGCTACTGAA AGGGAGTTAG AAGACGAATT TCGTGTTTAT GGAGTGCTGC GCAGGTTCTT GTCTTCCTAC TCCCCATCCT ATCGCGCGTG CGGCTGATAT CCGCTTTTTC AGTGCTCATC GTTTTCTTTC CGTGCTTGTT GATAGCCTTC GAGGTCAAGA CAGGAGTGTC GATTTTAGCT GCTTTGGCCC GTGAGAGACT ATGACCGTTC CTTCTTGGAC GGGTGCTAGG ATTGCTCTTC GGCTCTTTTT GTTCAGCAAT ACGTCCTGAG CTAATTTCCA CTTTCACGGT CGTCATGCTC ACAGCAGAAA TGCTCCTTGT GAGAACGGCT GCCCCTCTAG GAAACCTTCA TCCCGGGCCT GACAAACTGA ACTCAACGGG ACAACCTGGC TTATATCCTA CCTCCTATTC AAAACCTAAA TCTTGGATAT GGAATCTAGG TCCCCATGTG GAGTGGCGGG AGGGATTCCT ACCTGCTAGT GAGGAGTAAT ACCAGTCCTG TCGAAACTGG AGTGTCCTTC CACCTCTTTG TTGGAAGGAG CTGCAACGTT GTACTCGGAT GTTAATTTCT TTTGGTCACT TGCAGCATGT TCCTCGTTCT CCTCACTGTA AACGTGGAGA TTCTTTACCT TTCGTCATGA GTCATGAACC TACGCCTAGT CGATGGCTGT TCGTGCTACC ATGTGCATCT TTTTTCGTCT GTGCGGAATC TGCCTATGAT TCAAGTATGA TGATTAGAGA TGTACGTAGC TGATTGATGT TCTAAGTACG AAGTGTATAT CATTAGTTGT GTATCCCCTC CACTCCTCTC AGGATGTCCG ACGAGTGAGT TTTGTATGCA TTGATCAAAC GTTTTGATGG ATTAATGTCC TCAAAAGATT GCGCCTCTGT CATATTTTTT GAATTTTCCA ACTGATCAAG CTTCCTCTTA AGCACCTTCA GATGTTCGGA TCCCCTGGAC CTTTTGGAAG TTTATGGTTG ACGTGCACGC GATTCTTTTT CCTATCCTAG TCCGTGTTCT TCCGAAGAAA AATCTGAGCC TCAATTTTGC CTAACGAACT TTTTCCACAG TCATGGGGAC ATGTCATACC TTCCTAGGTG TGGTTTTTTT CCTGCGACCT GGCAAACTGG TCGGCCACAT TTACCGACGT TGAACTCGTC GTCATGTGAT GTGCCCCAGA GCCTTTCGAC GCCAAACTTC TTTGGTTTTT TCCAGTTTGA TCGCAGCTTC TGCATTAGTA GTCCATCTAT TGTCACTTCC TGAACATACT GTAAGTGAAG AGTCGGGACA TCTGTGATGG TTAGGAACGC CGGAGTCCAC CATTTTCCCA AGTCAGGGCA AACGTGACTT ATGTCACATT TGTTGCATAG CTGTGTCAGG CCCTGCACTT GATGCAAATT GTTGTACCCA GATCACATCC TAAAATAATA TTAAGGCCTG AGAACCTTGC TAGGCACCAT CTTAAAGCGA AGCAGCTCTT GCTTCGTCTT TAGAGGCCTC TTGTGAAGAA ATGTTCTATG TTTGCGGGAC TTATTCTAGC CTTGCAATCT TAATGACACA GTGTATGGGT GGCTCGGAAG CCTCCTGGCT TTGCATTTAT CGAGTTCGAG GATCGAAGGG ATGCAGATGA TGCCATCCGT GCTTTGAATG GTACGTTACG GGTTGTCTTT CTTGTCTCCT CGTTTCGGAG TGTGATGTAT TGTATGTGAT GCTGCTGAAC ACAGTGTTTG GGTAGCTCGC AAGCCGCCGG GTTTTGCATT TGTCGAGTTC GACGATCTTC GGGATGCCCA GGATGCAATA CGTGCCACGG ACGGTAAGTA CGCTTCCAGT AGGTGTTCGG TATCCCTTGA CTTTACATTG TAGAAAGTCA TACAGGTTGT TGTGGAACAG GGCCTCGAAA ACACGAAGAT TGGGCTCGTT CTACGCAGGC AAATATGCTT TGGTGTAACT TATGTTTTTG ATCACTGCTT TAAATTATCC TGAATTTGCA GTATCGTTGC GTAAATCTTC ACCAACTTCG GAACTCAGTG GCTAACCCAG TGACTTATAC TGCCGGATGA TTGTTATGGT AGGCCCTTCT CCTTGTTTGA GTCTAGATGC GAGCAAAGAA CTTAAACCTG GCTTGTTGTT CCACATTTTG GAAACCTTTT TCTCCACCTC TCTTAGCAGG CAAGAATGGA TGGAGAGTAG AGTTATCACG CAGCTCCGGA GGTGGTGGTG GTCCCCGAGG TAGAGGTGGA GATGACATGA AATGTTATGA GTGTGGAGAG CCCGGCCATT TTGCTCGTGA ATGCCGGTTG CGTATAGGTG CCGGTGGCCT TGGAACTGGA GGACGTGGCC GCAGCCGCAG TCCACGCTAT AGACGTAGTC CTAGTTATGG GCGCAGGTAT GTCGAGCTGT TTTTCTCTGT GTTCTTATAT TCCTCTAGAA GAACAGGTTT TTGATCGCGT GAATATCGGA GTCTCTATGT GGTTCATTTC TTGTATATAT TTCATACTCC CGAATAGAGG CTTGCAGAAC GTCCATGGAG CTGTTGCTGC TACATGTTGT TTTCGCTTTT GCCATAATCT TGATAAGACT TCAAGAAGTT CTGACGTCCG AAATCAGTGT ACTGTACAGT TTGGGAACGT GAAACATGTT GTCGAAGTAG CTTCATTTGT GTTAAGGAAC TACTTACAGA CGTCTACGTG TAGTTGAATT CAAATTTTGT TATTTCACGT CTGACCGTTT GTCCCTGTTT TTTTATCATG TACTTCTGCC TCTCGCCGTT GCTCCTTGTT GTCGCGGTCT TTATATATCT TCGCGTGCCG TCACTTTGTT GCTGTTCGCG ATCTGGTGTA TATTCGCTTC CTCATCATCG GGATATGAAA CGGTACAGAT AATTGGATTT TTCCAAGAAC TTGAGACTTT TGTTGTTGTC TAAGGAACTG AACTTGTTTT GACATTTCAC TTAGCTCATG CTTATAGCGA AGATGTGAAA GTGAAATATA CATGTAAATG AAGGAGTGGA AATTCCCATA GGTCTGCTAA CGCGCATTTC ATGAGTACGG CAGTACTTCT TGTAACGTGA AATTTACTGC TCGGCCTTGA AATATGGAAG TATGCTGTTT TTAAGCAAAT GGATGATCTC TTCCACTGAA TAGGTCATTG TAAAATTGGA CGCCGAGGCC AGTGAACCTG CTTGTATGAT ACTGATTGTT GAATTCGCTT TTTGGTTCCC TCAGCAGCAG TCGCAGTCCC GCGCGAGTTA GAAGTCGGTC ACCTGTGCGA AGAAGGAGTG CGTCTCCTGT TGTTCGCCGG GGACGGAGTC CGAGCCGATC CCCTCCACCA CCACGCCGAG ATCGACGAGT GTCACCAGTT GTAAATGGGT ACGAATCTTC AGATCAGTTT GAATTTGATC CTGGTGATTT AGTTGCATGC GAAAGTTTTA ATGTGCATCA TTTCAATGGT AGCTGTAATG AGCTTCGTTT TGAGATTCGT CGTCGTTACA GGATGTTTCC ATATCTGTTT CCTTCGCGTT CTGAGAAGTA CTTTTGGTTA TAACAGTGGT GAAAGCTGAG TCTTTGGTGT ACATCGTCAT CGACTTCATG TGACGACCAT GTGCTCTACC GACAGTCAGA ACTAATCATG GGAGCACCAT TGCAGGAGTC CCCTAGCACC AAGGGATCGC CGTCGCAGCC GGAGCCGGAG CCCATAGAGT TGATTATGCA TATGCATCGG AACATTGCTA GGGACCTCGG AGTCATGACT CACCTATGTA CTTTTGGAAG GGGCTTTGAA GAAACAACTA TGAGGGATTG TATTCCTGCA AACTTCAGAA TGCTGGATTT TTCGGCAGTT TTGTTAGCTC TGTTTGAGGT GACTACTCTG CTTGTATAAG CGGCTGGTTT GCAAAGTGAT GGCCTCACCA ACCATGTAGG CTATTGGCCC GATGAAAGTT TGGACTCTCC CTCCATGTGG CCGGCGTCTT CAGTAGTTCG GTCTCCTGCT GAAGCTCCGG CTGACTGCTA TTGTGATAAG TTTCTTTCCT GGTTGCCCTT TCCTTTTGGT CTGGTAGACT CTTGTTTTCG CAAAAAAACT ATGCTCGAAC ATGTGCAATC TTGTCAAGTT CCCAAAGAAC AAATTGCAGA ATATATGAAC AAGAAATGTG TATGATGGCC AGTCTAGATT CAAACTCACA GAGGCCTTGC CTTTGTTGCT GTGTTCTGAG GTGTGGTTCT GCTTAGAACG GCACGGCACG GCACTGCACT GCACTGCCTC CCTCGCCTCG GTAGTCTGCC TCTTCATTCA TTGTGGTCTC CCTATATAGC ATCATCAATG GCTGCCTACT CCTGCAAAGC TGCTACCTTT TGATCTGGGA GGGTTATTGT ATTCTGCTCG TCTCCGCTGT GGTCTACGGC ACAAATTCTA CATGTGAGGC ATGTCTCCCC TGGCTGCCAA GCATGGTAGC TTGTGTGGAC CAGCATGGAA CAAGGATGTA GTCTTGACTC AGCCGTCCAC AACAGATTTG CTGCTGTGTA TCCTCGTCCC TCTATTTGCG GCTCTTCTTC CTAAATCTAT ACAAGCTGTT GGAGTTATGC CAAGCCAAAC GCCCTTCCGT CGTGTCAATT GCCGTCTTTA TTTGTTCGCG TGTATTCCTA ACTCGTGTCT TTGTCGTGTC ATTGTCCGGA ACCTATTATA GATAGCCCTT GGTTTATCGC TTGAGTTCAT GCAAATAAAT TAGCATAGTG GGACAGTAGT ACATAGGTCG GATATATGCA TTAGAGTCAG ATGTCAGGAA GGTAGATTTG GTCTCGTTTA GTGGAGTCAT CTAAGTCGCA TTGAGGTCGG TCTTCGTTAG CTCTACTTTC AACAGATATA TAGTTTCAAG GCTAGGTTGT GCAGATTGTC AGAGGAATAC ATGGTTTAGA TCCGTGCTTG ACTCATCATA GATGTCTTGA GTATGTCCGA TAAACCTAAG AAAGGTATCC GAGTCTCAAT GTGTATTCCA ATGTTGTAAA TCTCATTCGC ACAATGTGAC AGAAAGAATG TGTTTTGTAC AAGACGAGGA TGATCTATAA TGGCTTTGCT ATCAGTTTGC TTTAGGGGTC TGAAGATTCG CAAGTTGAAT CGTAACTGTC ATGTTTGTCC GGTAGAAATA GCGGACGTGT TCTGTTGTTG AATGGTACCT CCTCTACCAT CCATGGAGGT CCATATGGAT AGACCAAGTT GAAGGGAGCA GGATGTAGGA CATCTATGCA GCGAATGTCT TAACTGCTTA CATTGTACTG TGAATGTCGG GGTCAACAAT GCAAGCCCAT TATGTATGGC CGACGACTAA TCTTCCGGAG CAACAAATAA CGATCAGAAC CTTCATTTTA TCTAGAGATG ATTAGTACAG TTTGTGTTCA GATCCTCATA TCAATGCGAA GGTTCAGTTC TCTGATTGAT AACACATTCT GAAGGTAACG CAAAGCTATA TGAAAGGGCG TTTGATTTGC CATTTGGTTT AGATAGGCTG CAAGTAATAA CCGGAAGGAC ACTGGTCCTC CTAGTTTGGT GATATCGATT AGCGAAAGTA GCGGCGAGAG GCACTTATTA TGTCCTGAGA ACCGAGCCTC GAGAATTAAA CGTGAAGAGT CTGCTTCGAG GCCTCAACAA AGTGTCTTTC GTGCCGTGTA AAAGCGTATA ACGCCGGTCT CCACTCCTGC CCATCAAACC ACATGATTCA AATGTCTTGC CGGAGAAGTG TTACATGGCG ATTTCGGCTT AATAACAACG TAGATGCCTC ACAGACACTG GACCGATGTT CCCTTTTGTA CCC |
mRNA UTR + CDS |
>Mapoly0071s0008.1 TGGTTTGAGA AGTGAAGCGA GTGGTGGGTC GATTTGACTT CACTTGTGTG CTTCGTTGAA GAGGTTTTGG AGTTCGGAGT CCTGAACTTG GTTACGAGTT GGAGGTGGTA CGAGCAGTAA GCGAGCAGGC TGGCCATGTC GCGTGTTTAC GTGGGGAACC TAGATCCCCG GGCTACTGAA AGGGAGTTAG AAGACGAATT TCGTGTTTAT GGAGTGCTGC GCAGTGTATG GGTGGCTCGG AAGCCTCCTG GCTTTGCATT TATCGAGTTC GAGGATCGAA GGGATGCAGA TGATGCCATC CGTGCTTTGA ATGCAGGCAA GAATGGATGG AGAGTAGAGT TATCACGCAG CTCCGGAGGT GGTGGTGGTC CCCGAGGTAG AGGTGGAGAT GACATGAAAT GTTATGAGTG TGGAGAGCCC GGCCATTTTG CTCGTGAATG CCGGTTGCGT ATAGGTGCCG GTGGCCTTGG AACTGGAGGA CGTGGCCGCA GCCGCAGTCC ACGCTATAGA CGTAGTCCTA GTTATGGGCG CAGCAGTCGC AGTCCCGCGC GAGTTAGAAG TCGGTCACCT GTGCGAAGAA GGAGTGCGTC TCCTGTTGTT CGCCGGGGAC GGAGTCCGAG CCGATCCCCT CCACCACCAC GCCGAGATCG ACGAGTGTCA CCAGTTGTAA ATGGGAGTCC CCTAGCACCA AGGGATCGCC GTCGCAGCCG GAGCCGGAGC CCATAGAGTT GATTATGCAT ATGCATCGGA ACATTGCTAG GGACCTCGGA GTCATGACTC ACCTATGTAC TTTTGGAAGG GGCTTTGAAG AAACAACTAT GAGGGATTGT ATTCCTGCAA ACTTCAGAAT GCTGGATTTT TCGGCAGTTT TGTTAGCTCT GTTTGAGGTG ACTACTCTGC TTGTATAAGC GGCTGGTTTG CAAAGTGATG GCCTCACCAA CCATGTAGGC TATTGGCCCG ATGAAAGTTT GGACTCTCCC TCCATGTGGC CGGCGTCTTC AGTAGTTCGG TCTCCTGCTG AAGCTCCGGC TGACTGCTAT TGTGATAAGT TTCTTTCCTG GTTGCCCTTT CCTTTTGGTC TGGTAGACTC TTGTTTTCGC AAAAAAACTA TGCTCGAACA TGTGCAATCT TGTCAAGTTC CCAAAGAACA AATTGCAGAA TATATGAACA AGAAATGTGT ATGATGGCCA GTCTAGATTC AAACTCACAG AGGCCTTGCC TTTGTTGCTG TGTTCTGAGG TGTGGTTCTG CTTAGAACGG CACGGCACGG CACTGCACTG CACTGCCTCC CTCGCCTCGG TAGTCTGCCT CTTCATTCAT TGTGGTCTCC CTATATAGCA TCATCAATGG CTGCCTACTC CTGCAAAGCT GCTACCTTTT GATCTGGGAG GGTTATTGTA TTCTGCTCGT CTCCGCTGTG GTCTACGGCA CAAATTCTAC ATGTGAGGCA TGTCTCCCCT GGCTGCCAAG CATGGTAGCT TGTGTGGACC AGCATGGAAC AAGGATGTAG TCTTGACTCA GCCGTCCACA ACAGATTTGC TGCTGTGTAT CCTCGTCCCT CTATTTGCGG CTCTTCTTCC TAAATCTATA CAAGCTGTTG GAGTTATGCC AAGCCAAACG CCCTTCCGTC GTGTCAATTG CCGTCTTTAT TTGTTCGCGT GTATTCCTAA CTCGTGTCTT TGTCGTGTCA TTGTCCGGAA CCTATTATAG ATAGCCCTTG GTTTATCGCT TGAGTTCATG CAAATAAATT AGCATAGTGG GACAGTAGTA CATAGGTCGG ATATATGCAT TAGAGTCAGA TGTCAGGAAG GTAGATTTGG TCTCGTTTAG TGGAGTCATC TAAGTCGCAT TGAGGTCGGT CTTCGTTAGC TCTACTTTCA ACAGATATAT AGTTTCAAGG CTAGGTTGTG CAGATTGTCA GAGGAATACA TGGTTTAGAT CCGTGCTTGA CTCATCATAG ATGTCTTGAG TATGTCCGAT AAACCTAAGA AAGGTATCCG AGTCTCAATG TGTATTCCAA TGTTGTAAAT CTCATTCGCA CAATGTGACA GAAAGAATGT GTTTTGTACA AGACGAGGAT GATCTATAAT GGCTTTGCTA TCAGTTTGCT TTAGGGGTCT GAAGATTCGC AAGTTGAATC GTAACTGTCA TGTTTGTCCG GTAGAAATAG CGGACGTGTT CTGTTGTTGA ATGGTACCTC CTCTACCATC CATGGAGGTC CATATGGATA GACCAAGTTG AAGGGAGCAG GATGTAGGAC ATCTATGCAG CGAATGTCTT AACTGCTTAC ATTGTACTGT GAATGTCGGG GTCAACAATG CAAGCCCATT ATGTATGGCC GACGACTAAT CTTCCGGAGC AACAAATAAC GATCAGAACC TTCATTTTAT CTAGAGATGA TTAGTACAGT TTGTGTTCAG ATCCTCATAT CAATGCGAAG GTTCAGTTCT CTGATTGATA ACACATTCTG AAGGTAACGC AAAGCTATAT GAAAGGGCGT TTGATTTGCC ATTTGGTTTA GATAGGCTGC AAGTAATAAC CGGAAGGACA CTGGTCCTCC TAGTTTGGTG ATATCGATTA GCGAAAGTAG CGGCGAGAGG CACTTATTAT GTCCTGAGAA CCGAGCCTCG AGAATTAAAC GTGAAGAGTC TGCTTCGAGG CCTCAACAAA GTGTCTTTCG TGCCGTGTAA AAGCGTATAA CGCCGGTCTC CACTCCTGCC CATCAAACCA CATGATTCAA ATGTCTTGCC GGAGAAGTGT TACATGGCGA TTTCGGCTTA ATAACAACGT AGATGCCTCA CAGACACTGG ACCGATGTTC CCTTTTGTAC CC |
CDS |
>Mapoly0071s0008.1 ATGTCGCGTG TTTACGTGGG GAACCTAGAT CCCCGGGCTA CTGAAAGGGA GTTAGAAGAC GAATTTCGTG TTTATGGAGT GCTGCGCAGT GTATGGGTGG CTCGGAAGCC TCCTGGCTTT GCATTTATCG AGTTCGAGGA TCGAAGGGAT GCAGATGATG CCATCCGTGC TTTGAATGCA GGCAAGAATG GATGGAGAGT AGAGTTATCA CGCAGCTCCG GAGGTGGTGG TGGTCCCCGA GGTAGAGGTG GAGATGACAT GAAATGTTAT GAGTGTGGAG AGCCCGGCCA TTTTGCTCGT GAATGCCGGT TGCGTATAGG TGCCGGTGGC CTTGGAACTG GAGGACGTGG CCGCAGCCGC AGTCCACGCT ATAGACGTAG TCCTAGTTAT GGGCGCAGCA GTCGCAGTCC CGCGCGAGTT AGAAGTCGGT CACCTGTGCG AAGAAGGAGT GCGTCTCCTG TTGTTCGCCG GGGACGGAGT CCGAGCCGAT CCCCTCCACC ACCACGCCGA GATCGACGAG TGTCACCAGT TGTAAATGGG AGTCCCCTAG CACCAAGGGA TCGCCGTCGC AGCCGGAGCC GGAGCCCATA G |
Protein |
>Mapoly0071s0008.1 MSRVYVGNLD PRATERELED EFRVYGVLRS VWVARKPPGF AFIEFEDRRD ADDAIRALNA GKNGWRVELS RSSGGGGGPR GRGGDDMKCY ECGEPGHFAR ECRLRIGAGG LGTGGRGRSR SPRYRRSPSY GRSSRSPARV RSRSPVRRRS ASPVVRRGRS PSRSPPPPRR DRRVSPVVNG SPLAPRDRRR SRSRSP |