Mp1g01960



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.20.10:FF:000006 Nuclear transcription factor Y subunit gamma
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR10252 HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
Pfam PF00125 Core histone H2A/H2B/H3/H4
Gene3D G3DSA:1.10.20.10 Histone, subunit A
SUPERFAMILY SSF47113 Histone-fold
KEGG K08066 nuclear transcription factor Y, gamma
KOG KOG1657 CCAAT-binding factor, subunit C (HAP5); N-term missing; [K]
MapolyID Mapoly0029s0049 -
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0046982 protein heterodimerization activity
GO GO:0003677 DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpCCAAT-NFYC4 transcription factor, CCAAT-NFYC Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g01960.1 chr1:2156617..2161361 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g01960.2 chr1:2156604..2161361 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.