Mp1g03430



Description

Annotation

Database ID Description
SUPERFAMILY SSF55666 Ribonuclease PH domain 2-like
PANTHER PTHR11097 EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
Gene3D G3DSA:3.30.230.70 -
Pfam PF03725 3' exoribonuclease family, domain 2
Pfam PF01138 3' exoribonuclease family, domain 1
CDD cd11368 RNase_PH_RRP45
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:3.30.230.70:FF:000007 Exosome complex component RRP45B
KEGG K03678 exosome complex component RRP45
KOG KOG1614 Exosomal 3'-5' exoribonuclease complex, subunit Rrp45; [J]
MapolyID Mapoly0005s0264 -
GO GO:0034475 U4 snRNA 3'-end processing
GO GO:0016075 rRNA catabolic process
GO GO:0034476 U5 snRNA 3'-end processing
GO GO:0000178 exosome (RNase complex)
GO GO:0000177 cytoplasmic exosome (RNase complex)
GO GO:0017091 mRNA 3'-UTR AU-rich region binding
GO GO:0043928 obsolete exonucleolytic catabolism of deadenylated mRNA
GO GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO GO:0034473 U1 snRNA 3'-end processing
GO GO:0000176 nuclear exosome (RNase complex)
GO GO:0071042 nuclear polyadenylation-dependent mRNA catabolic process
GO GO:0006396 RNA processing
GO GO:0071038 TRAMP-dependent tRNA surveillance pathway
GO GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process
GO GO:0034427 obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO GO:0071028 nuclear mRNA surveillance

Nomenclature

Gene symbol Product Transcript ID Status
MpCER7 Cuticle related protein, Regulation of Cuticle related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03430.1 chr1:3800172..3803661 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.