Mp1g05620



Description

Annotation

Database ID Description
SUPERFAMILY SSF48150 DNA-glycosylase
PANTHER PTHR46213 TRANSCRIPTIONAL ACTIVATOR DEMETER
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF15628 RRM in Demeter
SMART SM00525 ccc3
Gene3D G3DSA:1.10.1670.10 -
KOG KOG1921 Endonuclease III; N-term missing; [L]
MapolyID Mapoly0005s0045 -
GO GO:0003824 catalytic activity
GO GO:0051539 4 iron, 4 sulfur cluster binding
GO GO:0080111 obsolete DNA demethylation
GO GO:0019104 DNA N-glycosylase activity
GO GO:0006281 DNA repair
GO GO:0035514 DNA demethylase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpROS1a DNA demethylase, DNA glycosylase/lyase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g05620.1 chr1:6054401..6062299 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05620.2 chr1:6048757..6062306 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.