Mp1g06410



Description

Annotation

Database ID Description
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
SMART SM00487 ultradead3
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00176 SNF2-related domain
SMART SM00490 helicmild6
Pfam PF00271 Helicase conserved C-terminal domain
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR45821 SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED
KEGG K10875 DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
KOG KOG0390 DNA repair protein, SNF2 family; [L]
MapolyID Mapoly0043s0033 -
GO GO:0080188 gene silencing by siRNA-directed DNA methylation
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06410.1 chr1:6910827..6916173 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g06410.2 chr1:6910827..6916173 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.