Mp1g12070



Description

Annotation

Database ID Description
SMART SM00397 tSNARE_6
SUPERFAMILY SSF58038 SNARE fusion complex
Coils Coil Coil
CDD cd15841 SNARE_Qc
FunFam G3DSA:1.20.5.110:FF:000006 Syntaxin 6
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Gene3D G3DSA:1.20.5.110 -
Pfam PF05739 SNARE domain
PANTHER PTHR19957 SYNTAXIN
KEGG K08506 syntaxin of plants SYP7
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
MapolyID Mapoly0014s0021 -
GO GO:0000149 SNARE binding
GO GO:0006906 vesicle fusion
GO GO:0012505 endomembrane system
GO GO:0031201 SNARE complex
GO GO:0006886 intracellular protein transport
GO GO:0048278 vesicle docking
GO GO:0016021 membrane
GO GO:0005484 SNAP receptor activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7A Ortholog of Arabidopsis SYP7 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12070.1 chr1:12544555..12548035 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.