| Database | ID | Description |
|---|---|---|
| CDD | cd12334 | RRM1_SF3B4 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. |
| SMART | SM00360 | rrm1_1 |
| Pfam | PF00076 | RNA recognition motif |
| Gene3D | G3DSA:3.30.70.330 | - |
| PANTHER | PTHR13798 | RNA BINDING MOTIF RBM PROTEIN -RELATED |
| KOG | KOG0131 | Splicing factor 3b, subunit 4; C-term missing; [A] |
| MapolyID | Mapoly0019s0080 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpRBM7 | RNA BINDING MOTIF RBM PROTEIN -RELATED | Published |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g13100.1 AGGGTTAGAT GTAGAATACT CTAGAGATCG GAAGCGGACC GTAGCGTCGA GAGGATTTTG TTGCGCCGAG AAGCCGGGAA TTGATTTTGC CATGTTTTGG TTGCGACGCC GTTCCTACGA TTCGCAGCGT GTCGAGTGAG CTGTTCCACG TTGGGTCCCG TGCCGCGGGT GAAGTTTCTG TTTTTTGTGG CAAACGTTGC TCAGTTTACC GGTCCGGGAC GCTTCGATCG ACGATCTTGT TTTCAAAACT TGGCGTGCAA GTGTCGTCGC CATCTGGAGT TTTTGAAATT TGCACATACC GCCGTCGTCG AATCGGGGCA AGTGAATCAC GAGCTCGTAG CGGAGTGCTT GTGGGAATCT GGTCTGTCTC CTTCGTCGCT GTTTTTCTTT TTTCGAAGGA CCATCTCCTT TCGCATTGAT CTGCAGCACG TCGTCATGTC AAGCAACATG CAGGCCACCC TCTATATCGG TGAGTGTCTA CTAGTTTCGT CGGTCTGGCT CGGTAGGTTC TAGGTGGGTG TTTTTCCTGT CGATGGGATC TTGTAATCTC AAAAGTGTGT GCCGAGTCTC AATGCCTATC AGATCGCTAT TGTCCGTTCT AGCTTTATAC AGTCTACAAG GAGGCCAGCC ATCGCTGTCC CCTTACCTGG TGGTCCATGC ACAATTTGCT TCATGATTGT TCTTGTGTCC TGCATCAGGA TGTTTACGCC TCATTGTTCA TACCTTTGAT TGCCTGCTCC GTGGGCACCC CTGTATACGA GATGCAATCA CTCGCTGTTG CGAAGAGTTT CAGGTGCAAA ATCATCTGAA AACAGCTCGC ACCGGATCTA AGAGGCTCGC TTTAATCTTG TTCCCTGAAG GTTTCCTCCC ATGGTCTTAG GGTTTCGATC CCGTGTCCAC GGTGTTATTT TTGGTTAGAG TTCTGTCACG AACCGGCATT GTTTCAATAA ACCGGAAATC ATAGTAGTCA TTTTGTCGAG CAAGCCATCA CGACTTTGCA AGGTTGGGCT TTGAGGGCGG TTGGTGGATT CTTAATTATG GGATTGATCT TTACACTTAC TCCCTGCAGT ATCAAACCTT TTCATTTTAG AGTGACTGCG TTTTGTAGTA GCGAGCTTTG ATGTTCGCAA AGCGGATTTA TTCTTTGTTT TCTCGTTCCT TCTTGATTGT TCTTGACCGT TGGAACTGCA CTTGTTCTTT TGAACCAAGT CATATATTTG GTTTGGGTTC CTAGTGTTTA ACTTATTGAA CAGTAATAAT TTAGTCGAGC GAGATCGAAA TTGTACACTT CTAATTGGAG GAGTATTCGT CAATCTTAGG GAATTTGGAT GAGAGAGTGG ACGAGAGATT GCTCTACGAG ATTATGGTGC AGGCTGGACC TTTGGTAGAG GTTTACTTGC CTCGTGATAA AGAATCTAAG CGGCACAAAG GTTATGGTTT TGCGGAGTAT CGATCAGAAG AGAGTGCACA ATATGCCTTG AACTTGTTCT CAGGCCTTGT TACACTGTTT AATCGAACCC TGCGCTTCGC GGTAGGTTGT CAGCTTGACT GGTTGCTACC AGAACCCACT TACCTTTTCC CATTCTTAGA TTACTTTGCT GGCGGTGACG CCGGTTCTGC CATCTGTTTT ACCTACTTTG ACCGTAGCCA TGCTTCTCTT TTGCTCGAGG CATCGCAGTG ATTCAATTTG ATGTGGAAAA TTGCTAATAG ATATCTGGAG GAGGAAAATC ACCCCAATCA GGAGCCGGCG TAGACAAATC ATCTAACCGC GTCTCCATCG TGGACAAGCC TATTCATCCT TTGGTAGAGG ACTCAGGTCC AGGTACTCCG TGCCGAGCAC GTGATGTTAA GGGTTACTGT CAAAATTATT ATTCACAGAC TCATGCCTCT GAACAATATC CTTCTAGCTC AACAGGTAAG TTTTTACCTA TCCTCATGTA TACATGATAA GATGTTTTCT TGCTTTGCTA GCCGACCTAG TTGCACTTTA TTTGTCCATA TAGGCTTTAT GTGCGAAATA AGATACTAAT CTCGGATGAA ATGAGTAGAT GACGCTGCAA ACTCCAGTGT TTGAAATGTA CTGTGGAGTT CTTTGTGTAG ACAATGCATC GGCTAGGTTC CAAACTTAGA TATTCGTGCC GTGGCAAGTC GACTTTTGTC TTTCCTTTTT TCCTTCTTTT CACAAGTGGA TGCCGAATAA CCCTCTGTCA TTGTGACCTC AACTCTACTG CCCTTTTTAC GGATAAGTTA CGCTGTAGTC GTTGTCTTTG CGAACCGCGG CAAAATATTG ACTTCTGCAC TTACCCTGAC GTTTCTAACT TCACTTATTT CGGTGGTTTG TAATACGGAG CGTTAGTAAT AGTTTGTGGG AAAAGGATAT GAGGGTTGGA AGACGCCCGC AGCCATCCGG ACTTAGTTTG GATTCAGACC TTAGTCGTCT CTCGAACTGA AGATCTAGAC TTAACTTCTA GAGTCTTCCG TCCACGAGAA CCACCGTGCC GATTTAGCTC TAATGGTCAC AACTTATAAT ATTTGGGGTT TTCATTGATG AGCAGGGTAT GGAGGTCAGG ACATGGTGAA GACAGACAAC TTCTTAACTC CACCAACTCA TGCACAATAT TACAATGCCC ATTTAACTCA TTTAAGTCAG TGGGGTGTTC GGGCGAACTT CATGGGTCAT GCATATGCCC AATCCGCCTC CTTTGCAAGA TAATGCTATC TGTTGGATTA AATTAGAGCT AAACGAAGTA GAGAAGCAGC GAAAGAATTT TCCATCAATG GAGACGTTGA TGGTTGAGTG TATCATATGT ATCATACTGT CCACTCTGGT TTATACTCAA AGTTTTGGTC CATCGAAGTT GCCTCATCTA CTGGGTAACC TCAGATTGCT TCATCTGTTC CACATTATAC CCTTGGAGAT GGTTCATTAT TTTACAAATG TTAGACGTCT GAATTGACCT TGCCTTCATA TTAGGCCGAT TAGGTATCCA ATTCTTCAAT ACTGTCCCGC TGGATACTAC TAAGGCGCCA GACTTGAAGG CACTTGTACT GAGTACTCAT TATTTAATTC AACGAGGGTA TGAATGGAGC CTCTACGTGC ACTCTACTTT AGTACCATAT CTTTAGGTGG AGAGCCAGTA TACTCAGGTC TTCTGCCCTG ATTACTGATC TTCCCCCTGG GATTCCGGAG TATCCTCTTT TGGCGTCAAA TCTGCGTGAA GGAAGAGCTT GTCCACGGTT GTCACCTTCT GTGGTTGACT TAAGTTTTGG ACAAGTGTCA CATGGCACTA AGAATATCTT GCAGGAACTT TCCCGAAAAG CTTATAACCA AGATGAGCTG GCATCGTCCA TTTTTTTGTT TTTGTACAAG CTATTACATT ACGGTTTTTT TGGGGGATTT GAATCTATTA AGTTTTGCAG AGTTAGTTTG TGTTCAGATT TAGATCCCAT CAATCATCTT TCGGGTTTGA TCATTTGCAC CTTAGATTTA TACACCTGGC TGCCCCGTTT CATAATAACT TCAAAACATT CTCCTTCGGT GGCGCATTCT TTTAATGTTA ATTTTCTGTA TACTGATCTC AGATTC |
mRNA UTR + CDS |
| >Mp1g13100.1 AGGGTTAGAT GTAGAATACT CTAGAGATCG GAAGCGGACC GTAGCGTCGA GAGGATTTTG TTGCGCCGAG AAGCCGGGAA TTGATTTTGC CATGTTTTGG TTGCGACGCC GTTCCTACGA TTCGCAGCGT GTCGAGTGAG CTGTTCCACG TTGGGTCCCG TGCCGCGGGT GAAGTTTCTG TTTTTTGTGG CAAACGTTGC TCAGTTTACC GGTCCGGGAC GCTTCGATCG ACGATCTTGT TTTCAAAACT TGGCGTGCAA GTGTCGTCGC CATCTGGAGT TTTTGAAATT TGCACATACC GCCGTCGTCG AATCGGGGCA AGTGAATCAC GAGCTCGTAG CGGAGTGCTT GTGGGAATCT GGTCTGTCTC CTTCGTCGCT GTTTTTCTTT TTTCGAAGGA CCATCTCCTT TCGCATTGAT CTGCAGCACG TCGTCATGTC AAGCAACATG CAGGCCACCC TCTATATCGG GAATTTGGAT GAGAGAGTGG ACGAGAGATT GCTCTACGAG ATTATGGTGC AGGCTGGACC TTTGGTAGAG GTTTACTTGC CTCGTGATAA AGAATCTAAG CGGCACAAAG GTTATGGTTT TGCGGAGTAT CGATCAGAAG AGAGTGCACA ATATGCCTTG AACTTGTTCT CAGGCCTTGT TACACTGTTT AATCGAACCC TGCGCTTCGC GATATCTGGA GGAGGAAAAT CACCCCAATC AGGAGCCGGC GTAGACAAAT CATCTAACCG CGTCTCCATC GTGGACAAGC CTATTCATCC TTTGGTAGAG GACTCAGGTC CAGGTACTCC GTGCCGAGCA CGTGATGTTA AGGGTTACTG TCAAAATTAT TATTCACAGA CTCATGCCTC TGAACAATAT CCTTCTAGCT CAACAGGGTA TGGAGGTCAG GACATGGTGA AGACAGACAA CTTCTTAACT CCACCAACTC ATGCACAATA TTACAATGCC CATTTAACTC ATTTAAGTCA GTGGGGTGTT CGGGCGAACT TCATGGGTCA TGCATATGCC CAATCCGCCT CCTTTGCAAG ATAATGCTAT CTGTTGGATT AAATTAGAGC TAAACGAAGT AGAGAAGCAG CGAAAGAATT TTCCATCAAT GGAGACGTTG ATGGTTGAGT GTATCATATG TATCATACTG TCCACTCTGG TTTATACTCA AAGTTTTGGT CCATCGAAGT TGCCTCATCT ACTGGGTAAC CTCAGATTGC TTCATCTGTT CCACATTATA CCCTTGGAGA TGGTTCATTA TTTTACAAAT GTTAGACGTC TGAATTGACC TTGCCTTCAT ATTAGGCCGA TTAGGTATCC AATTCTTCAA TACTGTCCCG CTGGATACTA CTAAGGCGCC AGACTTGAAG GCACTTGTAC TGAGTACTCA TTATTTAATT CAACGAGGGT ATGAATGGAG CCTCTACGTG CACTCTACTT TAGTACCATA TCTTTAGGTG GAGAGCCAGT ATACTCAGGT CTTCTGCCCT GATTACTGAT CTTCCCCCTG GGATTCCGGA GTATCCTCTT TTGGCGTCAA ATCTGCGTGA AGGAAGAGCT TGTCCACGGT TGTCACCTTC TGTGGTTGAC TTAAGTTTTG GACAAGTGTC ACATGGCACT AAGAATATCT TGCAGGAACT TTCCCGAAAA GCTTATAACC AAGATGAGCT GGCATCGTCC ATTTTTTTGT TTTTGTACAA GCTATTACAT TACGGTTTTT TTGGGGGATT TGAATCTATT AAGTTTTGCA GAGTTAGTTT GTGTTCAGAT TTAGATCCCA TCAATCATCT TTCGGGTTTG ATCATTTGCA CCTTAGATTT ATACACCTGG CTGCCCCGTT TCATAATAAC TTCAAAACAT TCTCCTTCGG TGGCGCATTC TTTTAATGTT AATTTTCTGT ATACTGATCT CAGATTC |
CDS |
| >Mp1g13100.1 ATGTCAAGCA ACATGCAGGC CACCCTCTAT ATCGGGAATT TGGATGAGAG AGTGGACGAG AGATTGCTCT ACGAGATTAT GGTGCAGGCT GGACCTTTGG TAGAGGTTTA CTTGCCTCGT GATAAAGAAT CTAAGCGGCA CAAAGGTTAT GGTTTTGCGG AGTATCGATC AGAAGAGAGT GCACAATATG CCTTGAACTT GTTCTCAGGC CTTGTTACAC TGTTTAATCG AACCCTGCGC TTCGCGATAT CTGGAGGAGG AAAATCACCC CAATCAGGAG CCGGCGTAGA CAAATCATCT AACCGCGTCT CCATCGTGGA CAAGCCTATT CATCCTTTGG TAGAGGACTC AGGTCCAGGT ACTCCGTGCC GAGCACGTGA TGTTAAGGGT TACTGTCAAA ATTATTATTC ACAGACTCAT GCCTCTGAAC AATATCCTTC TAGCTCAACA GGGTATGGAG GTCAGGACAT GGTGAAGACA GACAACTTCT TAACTCCACC AACTCATGCA CAATATTACA ATGCCCATTT AACTCATTTA AGTCAGTGGG GTGTTCGGGC GAACTTCATG GGTCATGCAT ATGCCCAATC CGCCTCCTTT GCAAGATAA |
Protein |
| >Mp1g13100.1 MSSNMQATLY IGNLDERVDE RLLYEIMVQA GPLVEVYLPR DKESKRHKGY GFAEYRSEES AQYALNLFSG LVTLFNRTLR FAISGGGKSP QSGAGVDKSS NRVSIVDKPI HPLVEDSGPG TPCRARDVKG YCQNYYSQTH ASEQYPSSST GYGGQDMVKT DNFLTPPTHA QYYNAHLTHL SQWGVRANFM GHAYAQSASF AR |