Mp1g15660



Description

Annotation

Database ID Description
CDD cd06503 ATP-synt_Fo_b
Coils Coil Coil
FunFam G3DSA:3.30.160.60:FF:000554 protein indeterminate-domain 12-like
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
KEGG K25871 zinc finger protein IDD14/15/16
KOG KOG2072 Translation initiation factor 3, subunit a (eIF-3a); N-term missing; [J]
KOG KOG3608 Zn finger proteins; N-term missing; C-term missing; [R]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR10593 SERINE/THREONINE-PROTEIN KINASE RIO
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
SMART SM00355 c2h2final6
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus
MapolyID Mapoly0033s0095 -

Nomenclature

Gene symbol Product Transcript ID Status
MpIDDL2 transcription factor, IDD-related Published

Associated Literature (AI-based literature mining)

MpIDD family member whose expression is specific to gemma cups and strongly induced by IAA (auxin) treatment; interacts with MpGRAS3/MpSCR, suggesting a role in gemma cup development.

1 core 0 peripheral

Zhou C, Yang T, Cai M, Cui H, Yu F, Liu H, Fu J. (2025) · BMC Genomics  research experimental subject
MpIDD family member whose expression is specific to gemma cups and strongly induced by IAA (auxin) treatment; interacts with MpGRAS3/MpSCR, suggesting a role in gemma cup development.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15660.1 chr1:16310889..16317780 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g15660.2 chr1:16313017..16317780 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g15660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g15660 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.