Mp1g17790



Description

Annotation

Database ID Description
CDD cd19169 SET_SETD1
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR45814 HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
ProSiteProfiles PS50280 SET domain profile.
SUPERFAMILY SSF55277 GYF domain
ProSiteProfiles PS50829 GYF domain profile.
SMART SM00508 PostSET_3
Pfam PF00856 SET domain
SUPERFAMILY SSF82199 SET domain
Gene3D G3DSA:3.30.1490.40 -
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50868 Post-SET domain profile.
SMART SM00317 set_7
KEGG K11422 [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG0670 U4/U6-associated splicing factor PRP4; C-term missing; [A]
MapolyID Mapoly0001s0118 -
GO GO:0042800 histone H3K4 methyltransferase activity
GO GO:0051568 obsolete histone H3-K4 methylation
GO GO:0005515 protein binding
GO GO:0048188 Set1C/COMPASS complex

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR2 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17790.1 chr1:18555456..18574660 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.