| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD |
| Gene3D | G3DSA:3.30.70.330 | - |
| Pfam | PF00076 | RNA recognition motif |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. |
| PANTHER | PTHR48028 | GLYCINE-RICH RNA-BINDING PROTEIN RZ1A |
| SMART | SM00360 | rrm1_1 |
| CDD | cd21608 | RRM2_NsCP33_like |
| KOG | KOG0149 | Predicted RNA-binding protein SEB4 (RRM superfamily); C-term missing; [R] |
| MapolyID | Mapoly0001s0216 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGRP7 | RNA binding protein SEB4 | Published |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g18780.1 GAGCTCAAGT CAGGATTGTG ACAGAACTTG GCGTTCACGG GGTGTATGCC AATAAATTCA CGTCACTTCG GCTGTGCTCT GTAGGCTTTC ACTTCTGGTT CCCGCTGCGT CCGAGCAGCT AAGCTTTGGT TCCGTGGTTC GTCGGGTTCG AGATTCTCGT TATCGATCGG GGGATTTTTG CGGTGTATTG CCGATTTGGT TTGTTGCGGA GTGTCGGCAC CATGGGATCG AATCCGAACG AAAGTAATGT CGAATACAGG TGTTTCGTAG GAGGCCTCGC ATGGGCTACC ACCGATGAGC GTCTTGAGAA TGCATTCAGA CAGTTCGGAG AAGTCGTCGA GTGCAAGGTA AATTATTGGC GCTTGAATTG TCACCGCCGT GTGTTTCTCG TACTGAACTG CTTGTGAGTT TGACCCCGTG ACCGGCCAAT CTCCTCCGTG AACCCTCTCC GCCGGAAGCT TTTCGCAAGG TGCCCTACTC AGGTCTTCGA CTTCGAGAGG GACTTGCCCA AAGCGGCCTG TTATTGCGAC GGTCGTTGTA GTATCTGTCT AGTATTGCGG ACGCACGGTT TCTGCACTGG TTATAGTGTA AGGGCGGGGC GTGCAATTGA TTGCATACTT CTGTGGCCTG GCCGCCTTCG ATGTGCCTGT GATCAACGGA GCTGGGAGCA TGAGAGTGCC TGTGTTTACA CTGCAAGCCT GTAGTCCTAT CGTTCTGCTT TCATTTACTT TCACGAGTAC ATCTGTAGTC ATGTGGCTGC CAGGCCCGTT AGCTCCTCAC TAGACAAGTT TCGCTTTCTG CTAATGGTCG ATGTTTGGTG GACTGCAGGT TATTAGCGAT CGTGAAACCG GAAGGTCTCG TGGATTTGGT TTCGTAACTT TCCACGACGA GGCCGCGATG AAAGAAGCTA TCGAATCCAT GAATGGAAAG GAGCTTGATG GTCGTAACAT CACTGTCAAC CAGGCCCAGC AGAGGAACAG GGATGGAGGA GGCGGAGGTG GTGGATATGG TGGCGGACGT GGATACGGTG GTGGTGGTGG TGGAGGTAGC CGATACGGCG GCGGCGGTGG TGGATACGGT GGAAACCGTG ATGGTGGAAA CCGCAACGGT GGTGGATACG GTGGTGGAGG CTATGGTGGT GGTGGTGGTG ACAGAGGGTA CAGCAGCGGC GGCCAAGGCG GTGGTGGTTA CGGCCGTGGA GGAGCCGGCG GTGGCTACGG AGGAGGAGGT GCCGGCGGTG GCGAATCCAG ATGGAGAACT GACAACCGCA ACTCAGAATT CTAATTTGTG AATATACTTT CCTAATGTTG GGAGTCTGGG CTCTTCCGGG CGCTTCCAGT CTCTTTGGTT CTGTGATGAT TTCACTCTCT GGTCCCAACA CCTAAAGGGA GGGCCTCGTC TGAGGGCCTG CCGCTTCAGT TATCCGTGGA TGTGACATTT CACTCGCTCT GAGATCTTTC ATACTTGTCC GAACTTTTGA TTGCCATTTG GTAGGTGCAG TTTTGGAGCA CGAGATCGGC TCAAGCTTAC GTGATAGCTG CTCTTGTTCT TTTCTTAGGT GCCCTTAGGC GGCACGGTCT GTCCATGTAA TGGTTACTTG TTCTGGATCC TGCTTTCTCC GTGGTAATCA GCCTTCTGTT TTACTCACCG GAGTTAAAGA CATCTGGACC CTCCTCTGTA CCTGAACTGC TGGGTGTTGG GACATTGCGA TTTTGTTCTC CGTTACTTCT AGTAACTCAG GAGGATCAAG TCTAACGTGT GTACGAAAGC TACCAGTCGG AATCGCTCGG TTACTGTGAT GTGAAGTAGA TGCGGCGGCC AGGAGGCTGT CGCACAATTT TGATCGCTTT TACGAGAGAT TGGGTTTACT GGTGACAGCC ACGAAAGAGA GAAGAGTTCA TCTGTATGAG CATATACCCT TCGGAAAGGC GGGGCATGCT TGTTACATGT TGCAGATCTT GATATATAAT ATGGTCTTTT GGCCTCAGTT ACTTGTTTAT CCACACC |
mRNA UTR + CDS |
| >Mp1g18780.1 GAGCTCAAGT CAGGATTGTG ACAGAACTTG GCGTTCACGG GGTGTATGCC AATAAATTCA CGTCACTTCG GCTGTGCTCT GTAGGCTTTC ACTTCTGGTT CCCGCTGCGT CCGAGCAGCT AAGCTTTGGT TCCGTGGTTC GTCGGGTTCG AGATTCTCGT TATCGATCGG GGGATTTTTG CGGTGTATTG CCGATTTGGT TTGTTGCGGA GTGTCGGCAC CATGGGATCG AATCCGAACG AAAGTAATGT CGAATACAGG TGTTTCGTAG GAGGCCTCGC ATGGGCTACC ACCGATGAGC GTCTTGAGAA TGCATTCAGA CAGTTCGGAG AAGTCGTCGA GTGCAAGGTT ATTAGCGATC GTGAAACCGG AAGGTCTCGT GGATTTGGTT TCGTAACTTT CCACGACGAG GCCGCGATGA AAGAAGCTAT CGAATCCATG AATGGAAAGG AGCTTGATGG TCGTAACATC ACTGTCAACC AGGCCCAGCA GAGGAACAGG GATGGAGGAG GCGGAGGTGG TGGATATGGT GGCGGACGTG GATACGGTGG TGGTGGTGGT GGAGGTAGCC GATACGGCGG CGGCGGTGGT GGATACGGTG GAAACCGTGA TGGTGGAAAC CGCAACGGTG GTGGATACGG TGGTGGAGGC TATGGTGGTG GTGGTGGTGA CAGAGGGTAC AGCAGCGGCG GCCAAGGCGG TGGTGGTTAC GGCCGTGGAG GAGCCGGCGG TGGCTACGGA GGAGGAGGTG CCGGCGGTGG CGAATCCAGA TGGAGAACTG ACAACCGCAA CTCAGAATTC TAATTTGTGA ATATACTTTC CTAATGTTGG GAGTCTGGGC TCTTCCGGGC GCTTCCAGTC TCTTTGGTTC TGTGATGATT TCACTCTCTG GTCCCAACAC CTAAAGGGAG GGCCTCGTCT GAGGGCCTGC CGCTTCAGTT ATCCGTGGAT GTGACATTTC ACTCGCTCTG AGATCTTTCA TACTTGTCCG AACTTTTGAT TGCCATTTGG TAGGTGCAGT TTTGGAGCAC GAGATCGGCT CAAGCTTACG TGATAGCTGC TCTTGTTCTT TTCTTAGGTG CCCTTAGGCG GCACGGTCTG TCCATGTAAT GGTTACTTGT TCTGGATCCT GCTTTCTCCG TGGTAATCAG CCTTCTGTTT TACTCACCGG AGTTAAAGAC ATCTGGACCC TCCTCTGTAC CTGAACTGCT GGGTGTTGGG ACATTGCGAT TTTGTTCTCC GTTACTTCTA GTAACTCAGG AGGATCAAGT CTAACGTGTG TACGAAAGCT ACCAGTCGGA ATCGCTCGGT TACTGTGATG TGAAGTAGAT GCGGCGGCCA GGAGGCTGTC GCACAATTTT GATCGCTTTT ACGAGAGATT GGGTTTACTG GTGACAGCCA CGAAAGAGAG AAGAGTTCAT CTGTATGAGC ATATACCCTT CGGAAAGGCG GGGCATGCTT GTTACATGTT GCAGATCTTG ATATATAATA TGGTCTTTTG GCCTCAGTTA CTTGTTTATC CACACC |
CDS |
| >Mp1g18780.1 ATGGGATCGA ATCCGAACGA AAGTAATGTC GAATACAGGT GTTTCGTAGG AGGCCTCGCA TGGGCTACCA CCGATGAGCG TCTTGAGAAT GCATTCAGAC AGTTCGGAGA AGTCGTCGAG TGCAAGGTTA TTAGCGATCG TGAAACCGGA AGGTCTCGTG GATTTGGTTT CGTAACTTTC CACGACGAGG CCGCGATGAA AGAAGCTATC GAATCCATGA ATGGAAAGGA GCTTGATGGT CGTAACATCA CTGTCAACCA GGCCCAGCAG AGGAACAGGG ATGGAGGAGG CGGAGGTGGT GGATATGGTG GCGGACGTGG ATACGGTGGT GGTGGTGGTG GAGGTAGCCG ATACGGCGGC GGCGGTGGTG GATACGGTGG AAACCGTGAT GGTGGAAACC GCAACGGTGG TGGATACGGT GGTGGAGGCT ATGGTGGTGG TGGTGGTGAC AGAGGGTACA GCAGCGGCGG CCAAGGCGGT GGTGGTTACG GCCGTGGAGG AGCCGGCGGT GGCTACGGAG GAGGAGGTGC CGGCGGTGGC GAATCCAGAT GGAGAACTGA CAACCGCAAC TCAGAATTCT AA |
Protein |
| >Mp1g18780.1 MGSNPNESNV EYRCFVGGLA WATTDERLEN AFRQFGEVVE CKVISDRETG RSRGFGFVTF HDEAAMKEAI ESMNGKELDG RNITVNQAQQ RNRDGGGGGG GYGGGRGYGG GGGGGSRYGG GGGGYGGNRD GGNRNGGGYG GGGYGGGGGD RGYSSGGQGG GGYGRGGAGG GYGGGGAGGG ESRWRTDNRN SEF |