Mp1g20870



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.200 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
FunFam G3DSA:2.60.120.200:FF:000025 Xyloglucan endotransglucosylase/hydrolase
Pfam PF00722 Glycosyl hydrolases family 16
CDD cd02176 GH16_XET
Pfam PF06955 Xyloglucan endo-transglycosylase (XET) C-terminus
ProSiteProfiles PS51762 Glycosyl hydrolases family 16 (GH16) domain profile.
PANTHER PTHR31062 XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED
KEGG K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]
MapolyID Mapoly0001s0422 -
GO GO:0048046 apoplast
GO GO:0010411 xyloglucan metabolic process
GO GO:0044042 glucan metabolic process
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO GO:0005975 carbohydrate metabolic process
GO GO:0042546 cell wall biogenesis
GO GO:0016762 xyloglucan:xyloglucosyl transferase activity
GO GO:0005618 cell wall

Nomenclature

Gene symbol Product Transcript ID Status
MpGH16.2 Cell wall related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20870.1 chr1:21882605..21886281 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.