Mp1g24140



Description

Annotation

Database ID Description
SUPERFAMILY SSF46689 Homeodomain-like
SMART SM00389 HOX_1
Pfam PF01852 START domain
SUPERFAMILY SSF55961 Bet v1-like
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
CDD cd00086 homeodomain
SMART SM00234 START_1
Pfam PF00046 Homeodomain
ProSiteProfiles PS50071 'Homeobox' domain profile.
ProSiteProfiles PS50848 START domain profile.
CDD cd08875 START_ArGLABRA2_like
PANTHER PTHR45950 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14
Pfam PF08670 MEKHLA domain
Gene3D G3DSA:3.30.530.20 -
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; [K]
KOG KOG2761 START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer; N-term missing; [I]
MapolyID Mapoly0061s0107 -
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0008289 lipid binding
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC3HDZ transcription factor, HD, homeodomain protein Published
MpHD12 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g24140.1 chr1:25582032..25593846 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g24140.2 chr1:25581982..25589254 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.