| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain |
| PANTHER | PTHR12480 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| SMART | SM00558 | cupin_9 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS50181 | F-box domain profile. |
| Gene3D | G3DSA:2.60.120.650 | Cupin |
| Gene3D | G3DSA:1.20.1280.50 | - |
| ProSiteProfiles | PS51184 | JmjC domain profile. |
| FunFam | G3DSA:2.60.120.650:FF:000045 | F-box protein At1g78280 |
| Pfam | PF12937 | F-box-like |
| Pfam | PF13621 | Cupin-like domain |
| SMART | SM00256 | fbox_2 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like |
| KEGG | K11323 | histone arginine demethylase JMJD6 [EC:1.14.11.-] |
| KOG | KOG2130 | Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain; C-term missing; [BT] |
| KOG | KOG2120 | SCF ubiquitin ligase, Skp2 component; N-term missing; C-term missing; [O] |
| MapolyID | Mapoly0061s0019 | - |
| GO | GO:0005634 | nucleus |
| GO | GO:0000987 | cis-regulatory region sequence-specific DNA binding |
| GO | GO:0005515 | protein binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpHDM3 | Chromatin related protein | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g25060.1 AGAAAGTCTC TATAAAGAGA GTTTGTTCTT GACAGGCGAT TGTGCTCCTC CAACAAGGAC AGCGCTGTCC TTATTCTCAG ACTGTTCTTA TAAACTAGAG GCCTTGTATC GCAGTTGATG CCATTGGTGT CTTCATGCAG AAACACTCGA TACAGTGACA CGAGAATGCT CTGATCCTAG ATATGAATGC CTTGCCTGTA ATCTGGGCAC TCGAATACAA CAGGTGTACG TCGATGTGTT GGATTCCTGT CGGTCATGGG AATGGAGCAC GCGTCTGGAA TTTTGCTGGA ATCCTGACAT TGTAGCGCAC TTGATAAATG TGCCGAATTG TGGTGGTGCC CTTCGAAATT TGTGGATTGA TTCCGCTGCA TGGACATTTC AAATTCCTGA GCCAAGCGAA ACAGTCGTGT TCGCATTTTC GGCCTGGAGG ATAGTGAGAA GAGAAGTCCC TGTAGAGCAG TATGACGGGA GCGCCGGGCA GGGGGATTGA GAAATCCAAA CGGAAGAAGA AGAAAAAAGC AACTGCTGGA AATGGCCGTC TACTGGAATC TGAAGCTCGT GAGTCTAGCA ATGATCCGGA GTTTCGACTC CAGAGAGGAA CCAGCAGCTA TGGTGTGCAG CCTTTAGGAA ATCTACTCTT CCAGGAATCT TCTCATAACG TCAGGGATGT TGGCCTGGGT AGCCTGAGAT TACTGACCGA TGAGATTTTG CTCGACGTTT TGGGTCTTCT CTCTGCAGAA GACTTGGGTA AGCTGGCTCT GGTCAGTAAA TCATTTTACG TGTTCGTTCA TCAGGATTCG TTGTGGAGAA ATCTTGTGTT GAACGAATTT CGTGGAGACT TCATCTTCAG GGGAAGGTGG AAAAATGCGT ACATTACTAC TCGTTATCCC CAATTCAGCG GCCCTACGCA TGTTCCACTG AAAGTAAGAG ACACCACTTC CAAATTTCCA ATTTTGTGTT GTATAGTCTG GAGTGTACAG CGCATTATTC CAAGTTCTTC AGCACTGGTT GGTCTAGGCC GAGGCTTTAT CTCTTATGCT TGCGCGACGA CTTGTCTCAC GGCCAATTGC ATGCAAATTG CGTCCAGTGA CCCCTTATCA GCTTTGAGTG CTAATGTCAT TGACTCATGA AAAGTTTTGA AACTTTTCAA AACTGGAAGT GGACACGCCA TTAGGTGATC GTCATAGGCG GACGCGTTGG TCACACCGGC CAATTTTGTC TCGAGAGTTT ATGGGGCTTT CGAAATAATA ACTTCCCCAA CGCAGGAAAG GCTCCAAAAT GCGATGTTAT TTGGGGTTGC AAATTTTTTA TCCACTTTGT ATAACATGCC ATAAGACGTT AAATTTTCCT TTCTGCAAGC AAGAATCACG GACATGAGGA TCGTCATATA AGGAGTTTCA CAGTAGTTTT GTCCGCGTCG GTTCCACCGA ATTGGTGTAG TACAGTTGTT CGTGGTCGAA ATCCGCACTG ATCTTAATTC CACAAAAAGT TTTCCTTTTT TTCTCGGACA AAGACGGAGC AAGCAGATCT AAAGATCCCG TGGAGGAGCT ACTCATGGTT GGCATGTTGT GTCTACGCAG GTGAAGGGAT TTTATTCCGA CCATATTTTC CAAAGCTGGC TCTGTGCCAG CTTAGAAATT AAAACGGAGT GGCTCAGTCG GGACAATATC GAGCGGAGGT CTAACATTAG CCTGGAGGAA TTTGTCAAGG AATTCGAAGA ACCCAACAAA CCTCTTCTTC TGACGGGAGC TTTGGACCAT TGGCCAGCGC TTGCTAAGTG GGATCGAGAG TACCTGTTGA AGCACGCGGG AGAAGTGTCC TTCGCTTGTG GACCTGTGAA CATGAAATTG AAGGATTACT TTTCCTACTC AGATTTAGTG GAGGAGGAGA GGCCTTTATA CATTTTTGAC TCAAAGTTTG CGGAGAAAGC CCCCCAACTC GGCAAGGATT ACGACATACC TGTATATTTC AGGGAAGATC TTTTCTCTCT CCTGGGAAAC TCGAGACCGG ATTTTCGATG GTTGATATTG GGTCCAGCGA GATCAGGCTC ATCTTTTCAT ATCGACCCGA ACAGCACGTC TGCTTGGAAC GCTGTTGTCA GAGGATCTAA GAAGTGGGTT TTGTATCCAC CGGATGTTGT GCCCCCTGGA GTTTACCCTA GTCCAGATGG TGCTGAAGTT GCCTCTCCAG TGTCCCTCAC GGAGTGGTTT ATGAATTTTT ACGACGAGAC CCGACGGCGT AAGGAGAAGC CTATAGAGTG CATATGCAAA GCCGGAGAGG TGGTGTTCGT GCCGAATGGA TGGTGGCATA TTGTTATCAA CCTCGAAGAA TCAATAGCCA TCACACAAAA TTACGTCAGC AGGTAATTCT TATCAGATTG CTCGTGGATT GTGTGTACGT CTTATTGCTC ATAACGAATT GGTCCTCAAC TCTTATCTCG CCCTCAAAGG GTTTAGGGTA GACGCACATG TCCGAGCAGA CGGTCGCACT TGTAAGCCCT CATCTCCTTC CGTTAACTTT GATCAGACTG ATCACGAGAA CTCTCAACTT ATATGAGGTC TCGCCCTCTC ATTAATGCCC AAGAGCATGT TCCCACGAGA TGTTGTTCTC CGTTTTGAAA TTGAGCTACA GAGGAGTTGT AGTGGACTTC CAGGTGGCAT GCACAGCCGA AGCAAGAGAC TTTGGTTTTC CTGCAACGCA GAGTTCTTCA TACCTGATGA TATTCTCAGC ATCTGCTGGC AGGCTTTTGA TAACATCCGC ACGTTCCTGT TTGGCTTGAT GCAGGAGTAA CTTACTGAAC GTTCTGGATT TTTTGAACAA GCCCAATTCG AAGGAATTGG TATCCGGGAC CAGAGATCGG GAAACTTTGT ACGACAGATT CAGGAGAACG TATGAGAACA CCTTCCCAGG TACCATTGAA AATTTGAGCT GTGAAGCGGA TGAGAAAGCA AAAAAGCTTC TGAAAGAAAA GATCTCTTTC TGGGACACTG TGGCAGACAA CAAACAGGGG GGAGGTTTCA AGTTCGGATT CTAAAAACCT TCGAATGGGC ACTGAGCATG TAACTTGGAA ATTAATGTTT TCTCGAAGGG TCTTCATCGA GGAGCTTGGC ATCACGAAGA GCTCGACACG TCACTCCCTC GATTTGACTT CATCCAGAAG AGTACATGAT GGCTCTCCCG TTTCGTTACG AGGATTGTTC CAGGGATATG AGGATTATGA TTACGACTCG CATGCCCCAT CAGACCTGTT TTCAACGAAC TCCTTTCGCG GGGTTGAATG TATAAAATGC TCTCATTACA CTGCCAAAGG GTAATTTTAG CCTTTGAGCT GACAGTATAT TCTGGCCGAT GGT |
mRNA UTR + CDS |
| >Mp1g25060.1 AGAAAGTCTC TATAAAGAGA GTTTGTTCTT GACAGGCGAT TGTGCTCCTC CAACAAGGAC AGCGCTGTCC TTATTCTCAG ACTGTTCTTA TAAACTAGAG GCCTTGTATC GCAGTTGATG CCATTGGTGT CTTCATGCAG AAACACTCGA TACAGTGACA CGAGAATGCT CTGATCCTAG ATATGAATGC CTTGCCTGTA ATCTGGGCAC TCGAATACAA CAGGTGTACG TCGATGTGTT GGATTCCTGT CGGTCATGGG AATGGAGCAC GCGTCTGGAA TTTTGCTGGA ATCCTGACAT TGTAGCGCAC TTGATAAATG TGCCGAATTG TGGTGGTGCC CTTCGAAATT TGTGGATTGA TTCCGCTGCA TGGACATTTC AAATTCCTGA GCCAAGCGAA ACAGTCGTGT TCGCATTTTC GGCCTGGAGG ATAGTGAGAA GAGAAGTCCC TGTAGAGCAG TATGACGGGA GCGCCGGGCA GGGGGATTGA GAAATCCAAA CGGAAGAAGA AGAAAAAAGC AACTGCTGGA AATGGCCGTC TACTGGAATC TGAAGCTCGT GAGTCTAGCA ATGATCCGGA GTTTCGACTC CAGAGAGGAA CCAGCAGCTA TGGTGTGCAG CCTTTAGGAA ATCTACTCTT CCAGGAATCT TCTCATAACG TCAGGGATGT TGGCCTGGGT AGCCTGAGAT TACTGACCGA TGAGATTTTG CTCGACGTTT TGGGTCTTCT CTCTGCAGAA GACTTGGGTA AGCTGGCTCT GGTCAGTAAA TCATTTTACG TGTTCGTTCA TCAGGATTCG TTGTGGAGAA ATCTTGTGTT GAACGAATTT CGTGGAGACT TCATCTTCAG GGGAAGGTGG AAAAATGCGT ACATTACTAC TCGTTATCCC CAATTCAGCG GCCCTACGCA TGTTCCACTG AAAGTGAAGG GATTTTATTC CGACCATATT TTCCAAAGCT GGCTCTGTGC CAGCTTAGAA ATTAAAACGG AGTGGCTCAG TCGGGACAAT ATCGAGCGGA GGTCTAACAT TAGCCTGGAG GAATTTGTCA AGGAATTCGA AGAACCCAAC AAACCTCTTC TTCTGACGGG AGCTTTGGAC CATTGGCCAG CGCTTGCTAA GTGGGATCGA GAGTACCTGT TGAAGCACGC GGGAGAAGTG TCCTTCGCTT GTGGACCTGT GAACATGAAA TTGAAGGATT ACTTTTCCTA CTCAGATTTA GTGGAGGAGG AGAGGCCTTT ATACATTTTT GACTCAAAGT TTGCGGAGAA AGCCCCCCAA CTCGGCAAGG ATTACGACAT ACCTGTATAT TTCAGGGAAG ATCTTTTCTC TCTCCTGGGA AACTCGAGAC CGGATTTTCG ATGGTTGATA TTGGGTCCAG CGAGATCAGG CTCATCTTTT CATATCGACC CGAACAGCAC GTCTGCTTGG AACGCTGTTG TCAGAGGATC TAAGAAGTGG GTTTTGTATC CACCGGATGT TGTGCCCCCT GGAGTTTACC CTAGTCCAGA TGGTGCTGAA GTTGCCTCTC CAGTGTCCCT CACGGAGTGG TTTATGAATT TTTACGACGA GACCCGACGG CGTAAGGAGA AGCCTATAGA GTGCATATGC AAAGCCGGAG AGGTGGTGTT CGTGCCGAAT GGATGGTGGC ATATTGTTAT CAACCTCGAA GAATCAATAG CCATCACACA AAATTACGTC AGCAGGAGTA ACTTACTGAA CGTTCTGGAT TTTTTGAACA AGCCCAATTC GAAGGAATTG GTATCCGGGA CCAGAGATCG GGAAACTTTG TACGACAGAT TCAGGAGAAC GTATGAGAAC ACCTTCCCAG GTACCATTGA AAATTTGAGC TGTGAAGCGG ATGAGAAAGC AAAAAAGCTT CTGAAAGAAA AGATCTCTTT CTGGGACACT GTGGCAGACA ACAAACAGGG GGGAGGTTTC AAGTTCGGAT TCTAAAAACC TTCGAATGGG CACTGAGCAT GTAACTTGGA AATTAATGTT TTCTCGAAGG GTCTTCATCG AGGAGCTTGG CATCACGAAG AGCTCGACAC GTCACTCCCT CGATTTGACT TCATCCAGAA GAGTACATGA TGGCTCTCCC GTTTCGTTAC GAGGATTGTT CCAGGGATAT GAGGATTATG ATTACGACTC GCATGCCCCA TCAGACCTGT TTTCAACGAA CTCCTTTCGC GGGGTTGAAT GTATAAAATG CTCTCATTAC ACTGCCAAAG GGTAATTTTA GCCTTTGAGC TGACAGTATA TTCTGGCCGA TGGT |
CDS |
| >Mp1g25060.1 ATGACGGGAG CGCCGGGCAG GGGGATTGAG AAATCCAAAC GGAAGAAGAA GAAAAAAGCA ACTGCTGGAA ATGGCCGTCT ACTGGAATCT GAAGCTCGTG AGTCTAGCAA TGATCCGGAG TTTCGACTCC AGAGAGGAAC CAGCAGCTAT GGTGTGCAGC CTTTAGGAAA TCTACTCTTC CAGGAATCTT CTCATAACGT CAGGGATGTT GGCCTGGGTA GCCTGAGATT ACTGACCGAT GAGATTTTGC TCGACGTTTT GGGTCTTCTC TCTGCAGAAG ACTTGGGTAA GCTGGCTCTG GTCAGTAAAT CATTTTACGT GTTCGTTCAT CAGGATTCGT TGTGGAGAAA TCTTGTGTTG AACGAATTTC GTGGAGACTT CATCTTCAGG GGAAGGTGGA AAAATGCGTA CATTACTACT CGTTATCCCC AATTCAGCGG CCCTACGCAT GTTCCACTGA AAGTGAAGGG ATTTTATTCC GACCATATTT TCCAAAGCTG GCTCTGTGCC AGCTTAGAAA TTAAAACGGA GTGGCTCAGT CGGGACAATA TCGAGCGGAG GTCTAACATT AGCCTGGAGG AATTTGTCAA GGAATTCGAA GAACCCAACA AACCTCTTCT TCTGACGGGA GCTTTGGACC ATTGGCCAGC GCTTGCTAAG TGGGATCGAG AGTACCTGTT GAAGCACGCG GGAGAAGTGT CCTTCGCTTG TGGACCTGTG AACATGAAAT TGAAGGATTA CTTTTCCTAC TCAGATTTAG TGGAGGAGGA GAGGCCTTTA TACATTTTTG ACTCAAAGTT TGCGGAGAAA GCCCCCCAAC TCGGCAAGGA TTACGACATA CCTGTATATT TCAGGGAAGA TCTTTTCTCT CTCCTGGGAA ACTCGAGACC GGATTTTCGA TGGTTGATAT TGGGTCCAGC GAGATCAGGC TCATCTTTTC ATATCGACCC GAACAGCACG TCTGCTTGGA ACGCTGTTGT CAGAGGATCT AAGAAGTGGG TTTTGTATCC ACCGGATGTT GTGCCCCCTG GAGTTTACCC TAGTCCAGAT GGTGCTGAAG TTGCCTCTCC AGTGTCCCTC ACGGAGTGGT TTATGAATTT TTACGACGAG ACCCGACGGC GTAAGGAGAA GCCTATAGAG TGCATATGCA AAGCCGGAGA GGTGGTGTTC GTGCCGAATG GATGGTGGCA TATTGTTATC AACCTCGAAG AATCAATAGC CATCACACAA AATTACGTCA GCAGGAGTAA CTTACTGAAC GTTCTGGATT TTTTGAACAA GCCCAATTCG AAGGAATTGG TATCCGGGAC CAGAGATCGG GAAACTTTGT ACGACAGATT CAGGAGAACG TATGAGAACA CCTTCCCAGG TACCATTGAA AATTTGAGCT GTGAAGCGGA TGAGAAAGCA AAAAAGCTTC TGAAAGAAAA GATCTCTTTC TGGGACACTG TGGCAGACAA CAAACAGGGG GGAGGTTTCA AGTTCGGATT CTAA |
Protein |
| >Mp1g25060.1 MTGAPGRGIE KSKRKKKKKA TAGNGRLLES EARESSNDPE FRLQRGTSSY GVQPLGNLLF QESSHNVRDV GLGSLRLLTD EILLDVLGLL SAEDLGKLAL VSKSFYVFVH QDSLWRNLVL NEFRGDFIFR GRWKNAYITT RYPQFSGPTH VPLKVKGFYS DHIFQSWLCA SLEIKTEWLS RDNIERRSNI SLEEFVKEFE EPNKPLLLTG ALDHWPALAK WDREYLLKHA GEVSFACGPV NMKLKDYFSY SDLVEEERPL YIFDSKFAEK APQLGKDYDI PVYFREDLFS LLGNSRPDFR WLILGPARSG SSFHIDPNST SAWNAVVRGS KKWVLYPPDV VPPGVYPSPD GAEVASPVSL TEWFMNFYDE TRRRKEKPIE CICKAGEVVF VPNGWWHIVI NLEESIAITQ NYVSRSNLLN VLDFLNKPNS KELVSGTRDR ETLYDRFRRT YENTFPGTIE NLSCEADEKA KKLLKEKISF WDTVADNKQG GGFKFGF |