Mp1g27200



Description

Annotation

Database ID Description
ProSiteProfiles PS50077 HEAT repeat profile.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00400 WD domain, G-beta repeat
Pfam PF00069 Protein kinase domain
SMART SM00220 serkin_6
FunFam G3DSA:1.25.10.10:FF:000370 phosphoinositide 3-kinase regulatory subunit 4-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
Gene3D G3DSA:2.130.10.10 -
PRINTS PR00320 G protein beta WD-40 repeat signature
CDD cd13980 STKc_Vps15
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:1.25.10.10 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF50978 WD40 repeat-like
PANTHER PTHR17583 PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
SMART SM00320 WD40_4
SUPERFAMILY SSF48371 ARM repeat
KEGG K08333 phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
KOG KOG1240 Protein kinase containing WD40 repeats; [T]
MapolyID Mapoly0002s0158 -
GO GO:0045324 late endosome to vacuole transport
GO GO:0005770 late endosome
GO GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I
GO GO:0005524 ATP binding
GO GO:0030242 autophagy of peroxisome
GO GO:0005515 protein binding
GO GO:0004672 protein kinase activity
GO GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0016236 macroautophagy
GO GO:0006623 protein targeting to vacuole
GO GO:0071561 nucleus-vacuole junction

Nomenclature

Gene symbol Product Transcript ID Status
MpVPS15 Autophagy protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27200.1 chr1:28373573..28383771 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g27200.2 chr1:28374408..28383771 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.