Mp1g29760



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
Coils Coil Coil
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF00176 SNF2-related domain
SMART SM00490 helicmild6
FunFam G3DSA:3.40.50.10810:FF:000055 Protein CHROMATIN REMODELING 24
SMART SM00487 ultradead3
KEGG K20093 DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
KOG KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [KL]
MapolyID Mapoly0209s0008 -
GO GO:0015616 DNA translocase activity
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.9 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g29760.1 chr1:31710979..31719848 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.2 chr1:31710698..31719724 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.3 chr1:31710698..31719724 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.4 chr1:31710979..31719848 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.