Mp2g05060



Description

Annotation

Database ID Description
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
SMART SM00322 kh_6
SUPERFAMILY SSF90229 CCCH zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:4.10.1000.10 -
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Pfam PF00013 KH domain
ProSiteProfiles PS50084 Type-1 KH domain profile.
PANTHER PTHR12547 CCCH ZINC FINGER/TIS11-RELATED
SUPERFAMILY SSF54791 Eukaryotic type KH-domain (KH-domain type I)
SMART SM00356 c3hfinal6
Gene3D G3DSA:3.30.1370.10 K Homology domain, type 1
CDD cd22464 KH-I_AtC3H36_like
FunFam G3DSA:4.10.1000.10:FF:000003 Zinc finger CCCH domain-containing protein
Pfam PF14608 RNA-binding, Nab2-type zinc finger
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
KOG KOG2191 RNA-binding protein NOVA1/PASILLA and related KH domain proteins; N-term missing; C-term missing; [AR]
MapolyID Mapoly0031s0160 -
GO GO:0003729 mRNA binding
GO GO:0003723 RNA binding
GO GO:0003676 nucleic acid binding
GO GO:0046872 metal ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H8 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g05060.1 chr2:5763142..5769482 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.