Mp2g11050



Description

Annotation

Database ID Description
Pfam PF00957 Synaptobrevin
ProSiteProfiles PS50859 Longin domain profile.
CDD cd14824 Longin
PANTHER PTHR45837 VESICLE-TRAFFICKING PROTEIN SEC22B
FunFam G3DSA:1.20.5.110:FF:000028 25.3 kDa vesicle transport protein-like
FunFam G3DSA:3.30.450.50:FF:000003 25.3 kDa vesicle transport protein-like
Pfam PF13774 Regulated-SNARE-like domain
Gene3D G3DSA:1.20.5.110 -
SUPERFAMILY SSF64356 SNARE-like
CDD cd15866 R-SNARE_SEC22
Gene3D G3DSA:3.30.450.50 Longin domain
SMART SM01270 Longin_2
ProSiteProfiles PS50892 v-SNARE coiled-coil homology domain profile.
SUPERFAMILY SSF58038 SNARE fusion complex
KEGG K08517 vesicle transport protein SEC22
KOG KOG0862 Synaptobrevin/VAMP-like protein SEC22; [U]
MapolyID Mapoly0023s0071 -
GO GO:0005793 endoplasmic reticulum-Golgi intermediate compartment
GO GO:0005789 endoplasmic reticulum membrane
GO GO:0031201 SNARE complex
GO GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
GO GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO GO:0000139 Golgi membrane
GO GO:0012507 ER to Golgi transport vesicle membrane
GO GO:0048280 vesicle fusion with Golgi apparatus
GO GO:0005484 SNAP receptor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSEC22 Ortholog of Arabidopsis SEC22 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g11050.1 chr2:12074157..12077545 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.