Mp2g14140



Description

Annotation

Database ID Description
FunFam G3DSA:1.20.58.70:FF:000010 Syntaxin-43
Pfam PF05739 SNARE domain
SMART SM00503 SynN_4
CDD cd15845 SNARE_syntaxin16
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
Gene3D G3DSA:1.20.58.70 -
SMART SM00397 tSNARE_6
PANTHER PTHR19957 SYNTAXIN
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47661 t-snare proteins
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
KEGG K08489 syntaxin 16
KOG KOG0809 SNARE protein TLG2/Syntaxin 16; [U]
MapolyID Mapoly0042s0041 -
GO GO:0000149 SNARE binding
GO GO:0016192 vesicle-mediated transport
GO GO:0006906 vesicle fusion
GO GO:0012505 endomembrane system
GO GO:0031201 SNARE complex
GO GO:0006886 intracellular protein transport
GO GO:0048278 vesicle docking
GO GO:0016021 membrane
GO GO:0016020 membrane
GO GO:0005484 SNAP receptor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP4 Ortholog of Arabidopsis SYP4 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g14140.1 chr2:15792997..15798551 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g14140.2 chr2:15792997..15798551 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.