Mp2g14200



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SMART SM00487 ultradead3
Gene3D G3DSA:3.40.50.10810 -
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
SMART SM00490 helicmild6
Pfam PF00176 SNF2-related domain
Gene3D G3DSA:3.40.50.300 -
FunFam G3DSA:3.40.50.10810:FF:000019 DNA excision repair protein ERCC-6-like 2 isoform X1
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF14773 Helicase-associated putative binding domain, C-terminal
CDD cd18793 SF2_C_SNF
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
KEGG K20098 DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
KOG KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); N-term missing; [KL]
MapolyID Mapoly0042s0047 -
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.11 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g14200.1 chr2:15828043..15834088 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.