Mp2g15880



Description

Annotation

Database ID Description
CDD cd06071 Beach
Gene3D G3DSA:2.30.29.30 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF50978 WD40 repeat-like
Coils Coil Coil
ProSiteProfiles PS50197 BEACH domain profile.
Gene3D G3DSA:1.25.10.10 -
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
ProSiteProfiles PS51783 BEACH-type PH domain profile.
ProSiteProfiles PS50178 Zinc finger FYVE/FYVE-related type profile.
SMART SM00064 fyve_4
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
PANTHER PTHR46108 BLUE CHEESE
SMART SM00320 WD40_4
Gene3D G3DSA:2.60.120.200 -
FunFam G3DSA:1.10.1540.10:FF:000002 WD repeat and FYVE domain containing 3
CDD cd01201 PH_BEACH
SUPERFAMILY SSF48371 ARM repeat
Pfam PF02138 Beige/BEACH domain
Pfam PF14844 PH domain associated with Beige/BEACH
SUPERFAMILY SSF50729 PH domain-like
Gene3D G3DSA:2.130.10.10 -
Gene3D G3DSA:1.10.1540.10 BEACH domain
SMART SM01026 Beach_2
Pfam PF01363 FYVE zinc finger
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
Pfam PF00400 WD domain, G-beta repeat
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
SUPERFAMILY SSF81837 BEACH domain
KEGG K22262 WD repeat and FYVE domain-containing protein 3
KOG KOG1788 Uncharacterized conserved protein; [S]
KOG KOG1786 Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins; [TU]
KOG KOG1409 Uncharacterized conserved protein, contains WD40 repeats and FYVE domains; N-term missing; [S]
MapolyID Mapoly0082s0083 -
GO GO:0005515 protein binding
GO GO:0046872 metal ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSPIRRIG Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g15880.1 chr2:17684810..17705150 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.