Mp2g22250



Description

Annotation

Database ID Description
CDD cd10017 B3_DNA
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00847 AP2 domain
CDD cd00018 AP2
PANTHER PTHR31140 B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3
Gene3D G3DSA:2.40.330.10 -
Pfam PF02362 B3 DNA binding domain
ProSiteProfiles PS51032 AP2/ERF domain profile.
SMART SM00380 rav1_2
Gene3D G3DSA:3.30.730.10 AP2/ERF domain
SMART SM01019 B3_2
Gene3D G3DSA:3.10.20.90 -
SUPERFAMILY SSF54171 DNA-binding domain
FunFam G3DSA:3.30.730.10:FF:000008 AP2 domain-containing protein RAP2.8
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
KEGG K09287 RAV-like factor
MapolyID Mapoly0072s0102 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpAP2B3-1 transcription factor, AP2-B3 Published
MpRAV transcription factor, AP2-B3 Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g22250.1 chr2:27036376..27041915 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.