Mp2g26400



Description

Annotation

Database ID Description
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47001 TRANSCRIPTION FACTOR BHLH121
Coils Coil Coil
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
Gene3D G3DSA:4.10.280.10 -
CDD cd11446 bHLH_AtILR3_like
SMART SM00353 finulus
Pfam PF00010 Helix-loop-helix DNA-binding domain
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG0977 Nuclear envelope protein lamin, intermediate filament superfamily; C-term missing; [DY]
MapolyID Mapoly0025s0044 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH49 transcription factor, bHLH Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26400.1 chr2:32362387..32366440 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g26400.2 chr2:32362387..32366440 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.