Mp3g02320



Description

Annotation

Database ID Description
CDD cd00086 homeodomain
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Gene3D G3DSA:1.10.10.60 -
Pfam PF02183 Homeobox associated leucine zipper
SMART SM00389 HOX_1
FunFam G3DSA:1.10.10.60:FF:000159 Homeobox-leucine zipper protein HAT5
ProSiteProfiles PS50071 'Homeobox' domain profile.
ProSitePatterns PS00027 'Homeobox' domain signature.
PRINTS PR00031 Lambda-repressor HTH signature
Pfam PF00046 Homeodomain
PANTHER PTHR24326 HOMEOBOX-LEUCINE ZIPPER PROTEIN
SUPERFAMILY SSF46689 Homeodomain-like
KEGG K09338 homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; N-term missing; C-term missing; [K]
MapolyID Mapoly0007s0221 -
GO GO:0043565 sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0045893 positive regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpC1HDZ transcription factor, HD, homeodomain protein Published
MpHD3 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g02320.1 chr3:2365560..2370273 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.